Rhodius V - Search Results

1

Fine-tuning of the Escherichia coli sigmaE envelope stress response relies on multiple mechanisms to inhibit signal-independent proteolysis of the transmembrane anti-sigma factor, RseA.

Grigorova IL, Chaba R, Zhong HJ, Alba BM, Rhodius V, Herman C, Gross CA. Grigorova IL, et al. Among authors: rhodius v. Genes Dev. 2004 Nov 1;18(21):2686-97. doi: 10.1101/gad.1238604. Genes Dev. 2004. PMID: 15520285 Free PMC article.

2

Conserved and variable functions of the sigmaE stress response in related genomes.

Rhodius VA, Suh WC, Nonaka G, West J, Gross CA. Rhodius VA, et al. PLoS Biol. 2006 Jan;4(1):e2. doi: 10.1371/journal.pbio.0040002. PLoS Biol. 2006. PMID: 16336047 Free PMC article.

3

Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress.

Nonaka G, Blankschien M, Herman C, Gross CA, Rhodius VA. Nonaka G, et al. Genes Dev. 2006 Jul 1;20(13):1776-89. doi: 10.1101/gad.1428206. Genes Dev. 2006. PMID: 16818608 Free PMC article.

4

Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli.

Guisbert E, Rhodius VA, Ahuja N, Witkin E, Gross CA. Guisbert E, et al. J Bacteriol. 2007 Mar;189(5):1963-73. doi: 10.1128/JB.01243-06. Epub 2006 Dec 8. J Bacteriol. 2007. PMID: 17158661 Free PMC article.

5

Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition.

Koo BM, Rhodius VA, Nonaka G, deHaseth PL, Gross CA. Koo BM, et al. Among authors: rhodius va. Genes Dev. 2009 Oct 15;23(20):2426-36. doi: 10.1101/gad.1843709. Genes Dev. 2009. PMID: 19833768 Free PMC article.

6

Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon.

Gogol EB, Rhodius VA, Papenfort K, Vogel J, Gross CA. Gogol EB, et al. Among authors: rhodius va. Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12875-80. doi: 10.1073/pnas.1109379108. Epub 2011 Jul 18. Proc Natl Acad Sci U S A. 2011. PMID: 21768388 Free PMC article.

7

Predicting the strength of UP-elements and full-length E. coli σE promoters.

Rhodius VA, Mutalik VK, Gross CA. Rhodius VA, et al. Nucleic Acids Res. 2012 Apr;40(7):2907-24. doi: 10.1093/nar/gkr1190. Epub 2011 Dec 8. Nucleic Acids Res. 2012. PMID: 22156164 Free PMC article.

8

Convergence of molecular, modeling, and systems approaches for an understanding of the Escherichia coli heat shock response.

Guisbert E, Yura T, Rhodius VA, Gross CA. Guisbert E, et al. Microbiol Mol Biol Rev. 2008 Sep;72(3):545-54. doi: 10.1128/MMBR.00007-08. Microbiol Mol Biol Rev. 2008. PMID: 18772288 Free PMC article. Review.

9

Mutational analysis of Escherichia coli sigma28 and its target promoters reveals recognition of a composite -10 region, comprised of an 'extended -10' motif and a core -10 element.

Koo BM, Rhodius VA, Campbell EA, Gross CA. Koo BM, et al. Mol Microbiol. 2009 May;72(4):830-43. doi: 10.1111/j.1365-2958.2009.06691.x. Epub 2009 Apr 14. Mol Microbiol. 2009. PMID: 19400790 Free PMC article.

10

Dissection of recognition determinants of Escherichia coli sigma32 suggests a composite -10 region with an 'extended -10' motif and a core -10 element.

Koo BM, Rhodius VA, Campbell EA, Gross CA. Koo BM, et al. Among authors: rhodius va. Mol Microbiol. 2009 May;72(4):815-29. doi: 10.1111/j.1365-2958.2009.06690.x. Epub 2009 Apr 14. Mol Microbiol. 2009. PMID: 19400791 Free PMC article.

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