Suchard MA - Search Results

1

Evolution of human immunodeficiency virus type 1 coreceptor usage during antiretroviral Therapy: a Bayesian approach.

Kitchen CM, Philpott S, Burger H, Weiser B, Anastos K, Suchard MA. Kitchen CM, et al. Among authors: suchard ma. J Virol. 2004 Oct;78(20):11296-302. doi: 10.1128/JVI.78.20.11296-11302.2004. J Virol. 2004. PMID: 15452249 Free PMC article. Clinical Trial.

2

Bayesian selection of continuous-time Markov chain evolutionary models.

Suchard MA, Weiss RE, Sinsheimer JS. Suchard MA, et al. Mol Biol Evol. 2001 Jun;18(6):1001-13. doi: 10.1093/oxfordjournals.molbev.a003872. Mol Biol Evol. 2001. PMID: 11371589

3

Hierarchical phylogenetic models for analyzing multipartite sequence data.

Suchard MA, Kitchen CM, Sinsheimer JS, Weiss RE. Suchard MA, et al. Syst Biol. 2003 Oct;52(5):649-64. doi: 10.1080/10635150390238879. Syst Biol. 2003. PMID: 14530132

4

Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains.

Sinsheimer JS, Suchard MA, Dorman KS, Fang F, Weiss RE. Sinsheimer JS, et al. Among authors: suchard ma. Appl Bioinformatics. 2003;2(3):131-44. Appl Bioinformatics. 2003. PMID: 15130798 Review.

5

Phylogenetic mapping of recombination hotspots in human immunodeficiency virus via spatially smoothed change-point processes.

Minin VN, Dorman KS, Fang F, Suchard MA. Minin VN, et al. Among authors: suchard ma. Genetics. 2007 Apr;175(4):1773-85. doi: 10.1534/genetics.106.066258. Epub 2006 Dec 28. Genetics. 2007. PMID: 17194781 Free PMC article.

6

Continued evolution in gp41 after interruption of enfuvirtide in subjects with advanced HIV type 1 disease.

Kitchen CM, Lu J, Suchard MA, Hoh R, Martin JN, Kuritzkes DR, Deeks SG. Kitchen CM, et al. Among authors: suchard ma. AIDS Res Hum Retroviruses. 2006 Dec;22(12):1260-6. doi: 10.1089/aid.2006.22.1260. AIDS Res Hum Retroviruses. 2006. PMID: 17209769

7

Two-way Bayesian hierarchical phylogenetic models: An application to the co-evolution of gp120 and gp41 during and after enfuvirtide treatment.

Kitchen CM, Kroll J, Kuritzkes DR, Bloomquist E, Deeks SG, Suchard MA. Kitchen CM, et al. Among authors: suchard ma. Comput Stat Data Anal. 2009 Jan 15;53(3):766-775. doi: 10.1016/j.csda.2008.06.007. Comput Stat Data Anal. 2009. PMID: 20442796 Free PMC article.

8

Evolution and recombination of genes encoding HIV-1 drug resistance and tropism during antiretroviral therapy.

Shi B, Kitchen C, Weiser B, Mayers D, Foley B, Kemal K, Anastos K, Suchard M, Parker M, Brunner C, Burger H. Shi B, et al. Virology. 2010 Aug 15;404(1):5-20. doi: 10.1016/j.virol.2010.04.008. Epub 2010 May 8. Virology. 2010. PMID: 20451945 Free PMC article.

9

Phylogeographical footprint of colonial history in the global dispersal of human immunodeficiency virus type 2 group A.

Faria NR, Hodges-Mameletzis I, Silva JC, Rodés B, Erasmus S, Paolucci S, Ruelle J, Pieniazek D, Taveira N, Treviño A, Gonçalves MF, Jallow S, Xu L, Camacho RJ, Soriano V, Goubau P, de Sousa JD, Vandamme AM, Suchard MA, Lemey P. Faria NR, et al. Among authors: suchard ma. J Gen Virol. 2012 Apr;93(Pt 4):889-899. doi: 10.1099/vir.0.038638-0. Epub 2011 Dec 21. J Gen Virol. 2012. PMID: 22190015 Free PMC article.

10

Recombination between variants from genital tract and plasma: evolution of multidrug-resistant HIV type 1.

Kemal KS, Ramirez CM, Burger H, Foley B, Mayers D, Klimkait T, Hamy F, Anastos K, Petrovic K, Minin VN, Suchard MA, Weiser B. Kemal KS, et al. Among authors: suchard ma. AIDS Res Hum Retroviruses. 2012 Dec;28(12):1766-74. doi: 10.1089/AID.2011.0383. Epub 2012 Apr 10. AIDS Res Hum Retroviruses. 2012. PMID: 22364185 Free PMC article.

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