Zhurkin VB - Search Results

1

Protein-DNA hydrophobic recognition in the minor groove is facilitated by sugar switching.

Tolstorukov MY, Jernigan RL, Zhurkin VB. Tolstorukov MY, et al. Among authors: zhurkin vb. J Mol Biol. 2004 Mar 12;337(1):65-76. doi: 10.1016/j.jmb.2004.01.011. J Mol Biol. 2004. PMID: 15001352

2

Static and statistical bending of DNA evaluated by Monte Carlo simulations.

Zhurkin VB, Ulyanov NB, Gorin AA, Jernigan RL. Zhurkin VB, et al. Proc Natl Acad Sci U S A. 1991 Aug 15;88(16):7046-50. doi: 10.1073/pnas.88.16.7046. Proc Natl Acad Sci U S A. 1991. PMID: 1871119 Free PMC article.

3

Probing the structure of a putative intermediate in homologous recombination: the third strand in the parallel DNA triplex is in contact with the major groove of the duplex.

Kim MG, Zhurkin VB, Jernigan RL, Camerini-Otero RD. Kim MG, et al. Among authors: zhurkin vb. J Mol Biol. 1995 Apr 14;247(5):874-89. doi: 10.1006/jmbi.1994.0187. J Mol Biol. 1995. PMID: 7723038

4

CRP-DNA complexes: inducing the A-like form in the binding sites with an extended central spacer.

Ivanov VI, Minchenkova LE, Chernov BK, McPhie P, Ryu S, Garges S, Barber AM, Zhurkin VB, Adhya S. Ivanov VI, et al. Among authors: zhurkin vb. J Mol Biol. 1995 Jan 20;245(3):228-40. doi: 10.1006/jmbi.1994.0019. J Mol Biol. 1995. PMID: 7844815

5

B-DNA twisting correlates with base-pair morphology.

Gorin AA, Zhurkin VB, Olson WK. Gorin AA, et al. Among authors: zhurkin vb. J Mol Biol. 1995 Mar 17;247(1):34-48. doi: 10.1006/jmbi.1994.0120. J Mol Biol. 1995. PMID: 7897660

6

A parallel DNA triplex as a model for the intermediate in homologous recombination.

Zhurkin VB, Raghunathan G, Ulyanov NB, Camerini-Otero RD, Jernigan RL. Zhurkin VB, et al. J Mol Biol. 1994 Jun 3;239(2):181-200. doi: 10.1006/jmbi.1994.1362. J Mol Biol. 1994. PMID: 8196053

7

Influence of fluctuations on DNA curvature. A comparison of flexible and static wedge models of intrinsically bent DNA.

Olson WK, Marky NL, Jernigan RL, Zhurkin VB. Olson WK, et al. Among authors: zhurkin vb. J Mol Biol. 1993 Jul 20;232(2):530-54. doi: 10.1006/jmbi.1993.1409. J Mol Biol. 1993. PMID: 8345522

8

A role for CH...O interactions in protein-DNA recognition.

Mandel-Gutfreund Y, Margalit H, Jernigan RL, Zhurkin VB. Mandel-Gutfreund Y, et al. Among authors: zhurkin vb. J Mol Biol. 1998 Apr 17;277(5):1129-40. doi: 10.1006/jmbi.1998.1660. J Mol Biol. 1998. PMID: 9571027

9

p53-induced DNA bending and twisting: p53 tetramer binds on the outer side of a DNA loop and increases DNA twisting.

Nagaich AK, Zhurkin VB, Durell SR, Jernigan RL, Appella E, Harrington RE. Nagaich AK, et al. Among authors: zhurkin vb. Proc Natl Acad Sci U S A. 1999 Mar 2;96(5):1875-80. doi: 10.1073/pnas.96.5.1875. Proc Natl Acad Sci U S A. 1999. PMID: 10051562 Free PMC article.

10

DNA stretching and compression: large-scale simulations of double helical structures.

Kosikov KM, Gorin AA, Zhurkin VB, Olson WK. Kosikov KM, et al. Among authors: zhurkin vb. J Mol Biol. 1999 Jun 25;289(5):1301-26. doi: 10.1006/jmbi.1999.2798. J Mol Biol. 1999. PMID: 10373369

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