Lyubartsev AP - Search Results

1

Application of the Poisson Boltzmann polyelectrolyte model for analysis of equilibria between single-, double-, and triple-stranded polynucleotides in the presence of K(+), Na(+), and Mg(2+) ions.

Korolev N, Lyubartsev AP, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. J Biomol Struct Dyn. 2002 Oct;20(2):275-90. doi: 10.1080/07391102.2002.10506843. J Biomol Struct Dyn. 2002. PMID: 12354079

2

Application of polyelectrolyte theories for analysis of DNA melting in the presence of Na+ and Mg2+ ions.

Korolev N, Lyubartsev AP, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Biophys J. 1998 Dec;75(6):3041-56. doi: 10.1016/S0006-3495(98)77745-8. Biophys J. 1998. PMID: 9826624 Free PMC article.

3

Molecular dynamics simulations of DNA in solutions with different counter-ions.

Lyubartsev AP, Laaksonen A. Lyubartsev AP, et al. J Biomol Struct Dyn. 1998 Dec;16(3):579-92. doi: 10.1080/07391102.1998.10508271. J Biomol Struct Dyn. 1998. PMID: 10052615

4

Competitive binding of Mg2+, Ca2+, Na+, and K+ ions to DNA in oriented DNA fibers: experimental and Monte Carlo simulation results.

Korolev N, Lyubartsev AP, Rupprecht A, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Biophys J. 1999 Nov;77(5):2736-49. doi: 10.1016/s0006-3495(99)77107-9. Biophys J. 1999. PMID: 10545373 Free PMC article.

5

Competitive substitution of hexammine cobalt(III) for Na+ and K+ ions in oriented DNA fibers.

Korolev N, Lyubartsev AP, Rupprecht A, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Biopolymers. 2001 Mar;58(3):268-78. doi: 10.1002/1097-0282(200103)58:3<268::AID-BIP1004>3.0.CO;2-8. Biopolymers. 2001. PMID: 11169387

6

Spermine: an "invisible" component in the crystals of B-DNA. A grand canonical Monte Carlo and molecular dynamics simulation study.

Korolev N, Lyubartsev AP, Nordenskiöld L, Laaksonen A. Korolev N, et al. Among authors: lyubartsev ap. J Mol Biol. 2001 May 18;308(5):907-17. doi: 10.1006/jmbi.2001.4642. J Mol Biol. 2001. PMID: 11352581

7

On the competition between water, sodium ions, and spermine in binding to DNA: a molecular dynamics computer simulation study.

Korolev N, Lyubartsev AP, Laaksonen A, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Biophys J. 2002 Jun;82(6):2860-75. doi: 10.1016/S0006-3495(02)75628-2. Biophys J. 2002. PMID: 12023210 Free PMC article.

8

Metal ion-induced lateral aggregation of filamentous viruses fd and M13.

Tang JX, Janmey PA, Lyubartsev A, Nordenskiöld L. Tang JX, et al. Biophys J. 2002 Jul;83(1):566-81. doi: 10.1016/S0006-3495(02)75192-8. Biophys J. 2002. PMID: 12080143 Free PMC article.

9

Application of the Poisson Boltzmann polyelectrolyte model for analysis of thermal denaturation of DNA in the presence of Na+ and polyamine cations.

Korolev N, Lyubartsev AP, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Biophys Chem. 2003 May 1;104(1):55-66. doi: 10.1016/s0301-4622(02)00338-1. Biophys Chem. 2003. PMID: 12834827

10

A molecular dynamics simulation study of oriented DNA with polyamine and sodium counterions: diffusion and averaged binding of water and cations.

Korolev N, Lyubartsev AP, Laaksonen A, Nordenskiöld L. Korolev N, et al. Among authors: lyubartsev ap. Nucleic Acids Res. 2003 Oct 15;31(20):5971-81. doi: 10.1093/nar/gkg802. Nucleic Acids Res. 2003. PMID: 14530445 Free PMC article.

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