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Full-length messenger RNA sequences greatly improve genome annotation.
Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL. Haas BJ, et al. Among authors: volfovsky n. Genome Biol. 2002;3(6):RESEARCH0029. doi: 10.1186/gb-2002-3-6-research0029. Epub 2002 May 30. Genome Biol. 2002. PMID: 12093376 Free PMC article.
Computational discovery of internal micro-exons.
Volfovsky N, Haas BJ, Salzberg SL. Volfovsky N, et al. Genome Res. 2003 Jun;13(6A):1216-21. doi: 10.1101/gr.677503. Genome Res. 2003. PMID: 12799353 Free PMC article.
A clustering method for repeat analysis in DNA sequences.
Volfovsky N, Haas BJ, Salzberg SL. Volfovsky N, et al. Genome Biol. 2001;2(8):RESEARCH0027. doi: 10.1186/gb-2001-2-8-research0027. Epub 2001 Aug 1. Genome Biol. 2001. PMID: 11532211 Free PMC article.
Initial sequence and comparative analysis of the cat genome.
Pontius JU, Mullikin JC, Smith DR; Agencourt Sequencing Team; Lindblad-Toh K, Gnerre S, Clamp M, Chang J, Stephens R, Neelam B, Volfovsky N, Schäffer AA, Agarwala R, Narfström K, Murphy WJ, Giger U, Roca AL, Antunes A, Menotti-Raymond M, Yuhki N, Pecon-Slattery J, Johnson WE, Bourque G, Tesler G; NISC Comparative Sequencing Program; O'Brien SJ. Pontius JU, et al. Among authors: volfovsky n. Genome Res. 2007 Nov;17(11):1675-89. doi: 10.1101/gr.6380007. Genome Res. 2007. PMID: 17975172 Free PMC article.
MicroRNAs and genomic instability.
Huppi K, Volfovsky N, Mackiewicz M, Runfola T, Jones TL, Martin SE, Stephens R, Caplen NJ. Huppi K, et al. Among authors: volfovsky n. Semin Cancer Biol. 2007 Feb;17(1):65-73. doi: 10.1016/j.semcancer.2006.10.004. Epub 2006 Oct 26. Semin Cancer Biol. 2007. PMID: 17113784 Free PMC article. Review.
Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders.
Gillentine MA, Wang T, Hoekzema K, Rosenfeld J, Liu P, Guo H, Kim CN, De Vries BBA, Vissers LELM, Nordenskjold M, Kvarnung M, Lindstrand A, Nordgren A, Gecz J, Iascone M, Cereda A, Scatigno A, Maitz S, Zanni G, Bertini E, Zweier C, Schuhmann S, Wiesener A, Pepper M, Panjwani H, Torti E, Abid F, Anselm I, Srivastava S, Atwal P, Bacino CA, Bhat G, Cobian K, Bird LM, Friedman J, Wright MS, Callewaert B, Petit F, Mathieu S, Afenjar A, Christensen CK, White KM, Elpeleg O, Berger I, Espineli EJ, Fagerberg C, Brasch-Andersen C, Hansen LK, Feyma T, Hughes S, Thiffault I, Sullivan B, Yan S, Keller K, Keren B, Mignot C, Kooy F, Meuwissen M, Basinger A, Kukolich M, Philips M, Ortega L, Drummond-Borg M, Lauridsen M, Sorensen K, Lehman A; CAUSES Study; Lopez-Rangel E, Levy P, Lessel D, Lotze T, Madan-Khetarpal S, Sebastian J, Vento J, Vats D, Benman LM, Mckee S, Mirzaa GM, Muss C, Pappas J, Peeters H, Romano C, Elia M, Galesi O, Simon MEH, van Gassen KLI, Simpson K, Stratton R, Syed S, Thevenon J, Palafoll IV, Vitobello A, Bournez M, Faivre L, Xia K; SPARK Consortium; Earl RK, Nowakowski T, Bernier RA, Eichler EE. Gillentine MA, et al. Genome Med. 2021 Apr 19;13(1):63. doi: 10.1186/s13073-021-00870-6. Genome Med. 2021. PMID: 33874999 Free PMC article.
Non-B DB v2.0: a database of predicted non-B DNA-forming motifs and its associated tools.
Cer RZ, Donohue DE, Mudunuri US, Temiz NA, Loss MA, Starner NJ, Halusa GN, Volfovsky N, Yi M, Luke BT, Bacolla A, Collins JR, Stephens RM. Cer RZ, et al. Among authors: volfovsky n. Nucleic Acids Res. 2013 Jan;41(Database issue):D94-D100. doi: 10.1093/nar/gks955. Epub 2012 Nov 3. Nucleic Acids Res. 2013. PMID: 23125372 Free PMC article.
39 results