Agarwalla S - Search Results

1

Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli.

Agarwalla S, Kealey JT, Santi DV, Stroud RM. Agarwalla S, et al. J Biol Chem. 2002 Mar 15;277(11):8835-40. doi: 10.1074/jbc.M111825200. Epub 2002 Jan 4. J Biol Chem. 2002. PMID: 11779873 Free article.

2

Crystal structure of RumA, an iron-sulfur cluster containing E. coli ribosomal RNA 5-methyluridine methyltransferase.

Lee TT, Agarwalla S, Stroud RM. Lee TT, et al. Among authors: agarwalla s. Structure. 2004 Mar;12(3):397-407. doi: 10.1016/j.str.2004.02.009. Structure. 2004. PMID: 15016356 Free article.

3

Redox reactions of the iron-sulfur cluster in a ribosomal RNA methyltransferase, RumA: optical and EPR studies.

Agarwalla S, Stroud RM, Gaffney BJ. Agarwalla S, et al. J Biol Chem. 2004 Aug 13;279(33):34123-9. doi: 10.1074/jbc.M405702200. Epub 2004 Jun 4. J Biol Chem. 2004. PMID: 15181002 Free PMC article.

An unprecedented [4Fe-4S] iron-sulfur cluster was found in RumA, the enzyme that methylates U1939 in Escherichia coli 23 S ribosomal RNA (Agarwalla, S., Kealey, J. T., Santi, D. V., and Stroud, R. M. (2002) J. Biol. Chem. 277, 8835-8840; Lee, T. T., Agarwa …

An unprecedented [4Fe-4S] iron-sulfur cluster was found in RumA, the enzyme that methylates U1939 in Escherichia coli 23 S ribosomal …

4

A unique RNA Fold in the RumA-RNA-cofactor ternary complex contributes to substrate selectivity and enzymatic function.

Lee TT, Agarwalla S, Stroud RM. Lee TT, et al. Among authors: agarwalla s. Cell. 2005 Mar 11;120(5):599-611. doi: 10.1016/j.cell.2004.12.037. Cell. 2005. PMID: 15766524 Free article.

5

Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit.

Pan H, Agarwalla S, Moustakas DT, Finer-Moore J, Stroud RM. Pan H, et al. Among authors: agarwalla s. Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12648-53. doi: 10.1073/pnas.2135585100. Epub 2003 Oct 17. Proc Natl Acad Sci U S A. 2003. PMID: 14566049 Free PMC article.

6

A novel dCMP methylase by engineering thymidylate synthase.

Agarwalla S, LaPorte S, Liu L, Finer-Moore J, Stroud RM, Santi DV. Agarwalla S, et al. Biochemistry. 1997 Dec 16;36(50):15909-17. doi: 10.1021/bi971873h. Biochemistry. 1997. PMID: 9398324

7

Covalent tethering of the dimer interface annuls aggregation in thymidylate synthase.

Agarwalla S, Gokhale RS, Santi DV, Balaram P. Agarwalla S, et al. Protein Sci. 1996 Feb;5(2):270-7. doi: 10.1002/pro.5560050211. Protein Sci. 1996. PMID: 8745405 Free PMC article.

8

Covalent reinforcement of a fragile region in the dimeric enzyme thymidylate synthase stabilizes the protein against chaotrope-induced unfolding.

Gokhale RS, Agarwalla S, Santi DV, Balaram P. Gokhale RS, et al. Among authors: agarwalla s. Biochemistry. 1996 Jun 4;35(22):7150-8. doi: 10.1021/bi952890e. Biochemistry. 1996. PMID: 8679542

9

Thermal stabilization of thymidylate synthase by engineering two disulfide bridges across the dimer interface.

Gokhale RS, Agarwalla S, Francis VS, Santi DV, Balaram P. Gokhale RS, et al. Among authors: agarwalla s. J Mol Biol. 1994 Jan 7;235(1):89-94. doi: 10.1016/s0022-2836(05)80018-x. J Mol Biol. 1994. PMID: 7904654

10

Experimental and computational assessment of conditionally essential genes in Escherichia coli.

Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson BØ, Agarwalla S. Joyce AR, et al. Among authors: agarwalla s. J Bacteriol. 2006 Dec;188(23):8259-71. doi: 10.1128/JB.00740-06. Epub 2006 Sep 29. J Bacteriol. 2006. PMID: 17012394 Free PMC article.

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