Rouzé P - Search Results

1

A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling.

Thijs G, Lescot M, Marchal K, Rombauts S, De Moor B, Rouzé P, Moreau Y. Thijs G, et al. Among authors: rouze p. Bioinformatics. 2001 Dec;17(12):1113-22. doi: 10.1093/bioinformatics/17.12.1113. Bioinformatics. 2001. PMID: 11751219

2

INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling.

Thijs G, Moreau Y, De Smet F, Mathys J, Lescot M, Rombauts S, Rouze P, De Moor B, Marchal K. Thijs G, et al. Among authors: rouze p. Bioinformatics. 2002 Feb;18(2):331-2. doi: 10.1093/bioinformatics/18.2.331. Bioinformatics. 2002. PMID: 11847086

3

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

Thijs G, Marchal K, Lescot M, Rombauts S, De Moor B, Rouzé P, Moreau Y. Thijs G, et al. Among authors: rouze p. J Comput Biol. 2002;9(2):447-64. doi: 10.1089/10665270252935566. J Comput Biol. 2002. PMID: 12015892 Free article.

4

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

Lescot M, Déhais P, Thijs G, Marchal K, Moreau Y, Van de Peer Y, Rouzé P, Rombauts S. Lescot M, et al. Among authors: rouze p. Nucleic Acids Res. 2002 Jan 1;30(1):325-7. doi: 10.1093/nar/30.1.325. Nucleic Acids Res. 2002. PMID: 11752327 Free PMC article.

5

AFLPinSilico, simulating AFLP fingerprints.

Rombauts S, Van De Peer Y, Rouzé P. Rombauts S, et al. Among authors: rouze p. Bioinformatics. 2003 Apr 12;19(6):776-7. doi: 10.1093/bioinformatics/btg090. Bioinformatics. 2003. PMID: 12691992

6

Computational approaches to identify promoters and cis-regulatory elements in plant genomes.

Rombauts S, Florquin K, Lescot M, Marchal K, Rouzé P, van de Peer Y. Rombauts S, et al. Among authors: rouze p. Plant Physiol. 2003 Jul;132(3):1162-76. doi: 10.1104/pp.102.017715. Plant Physiol. 2003. PMID: 12857799 Free PMC article. Review.

7

Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences.

Pavy N, Rombauts S, Déhais P, Mathé C, Ramana DV, Leroy P, Rouzé P. Pavy N, et al. Among authors: rouze p. Bioinformatics. 1999 Nov;15(11):887-99. doi: 10.1093/bioinformatics/15.11.887. Bioinformatics. 1999. PMID: 10743555

8

PlantCARE, a plant cis-acting regulatory element database.

Rombauts S, Déhais P, Van Montagu M, Rouzé P. Rombauts S, et al. Among authors: rouze p. Nucleic Acids Res. 1999 Jan 1;27(1):295-6. doi: 10.1093/nar/27.1.295. Nucleic Acids Res. 1999. PMID: 9847207 Free PMC article.

9

Gene prediction and gene classes in Arabidopsis thaliana.

Mathé C, Déhais P, Pavy N, Rombauts S, Van Montagu M, Rouzé P. Mathé C, et al. Among authors: rouze p. J Biotechnol. 2000 Mar 31;78(3):293-9. doi: 10.1016/s0168-1656(00)00196-6. J Biotechnol. 2000. PMID: 10751690

10

Genome annotation: which tools do we have for it?

Rouzé P, Pavy N, Rombauts S. Rouzé P, et al. Curr Opin Plant Biol. 1999 Apr;2(2):90-5. doi: 10.1016/S1369-5266(99)80019-3. Curr Opin Plant Biol. 1999. PMID: 10322203 Review.

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