Pe'er I - Search Results

1

On the complexity of positional sequencing by hybridization.

Ben-Dor A, Pe'er I, Shamir R, Sharan R. Ben-Dor A, et al. J Comput Biol. 2001;8(4):361-71. doi: 10.1089/106652701752236188. J Comput Biol. 2001. PMID: 11571072

2

Spectrum alignment: efficient resequencing by hybridization.

Pe'er I, Shamir R. Pe'er I, et al. Proc Int Conf Intell Syst Mol Biol. 2000;8:260-8. Proc Int Conf Intell Syst Mol Biol. 2000. PMID: 10977087

3

An algorithm combining discrete and continuous methods for optical mapping.

Karp RM, Pe'er I, Shamir R. Karp RM, et al. J Comput Biol. 2000;7(5):745-60. doi: 10.1089/106652701446189. J Comput Biol. 2000. PMID: 11153097

4

A computational method for resequencing long DNA targets by universal oligonucleotide arrays.

Pe'er I, Arbili N, Shamir R. Pe'er I, et al. Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15492-6. doi: 10.1073/pnas.232278299. Epub 2002 Nov 12. Proc Natl Acad Sci U S A. 2002. PMID: 12429861 Free PMC article.

5

An algorithm combining discrete and continuous methods for optical mapping.

Karp RM, Pe'er I, Shamir R. Karp RM, et al. Proc Int Conf Intell Syst Mol Biol. 1999:159-68. Proc Int Conf Intell Syst Mol Biol. 1999. PMID: 10786298

6

A fast algorithm for joint reconstruction of ancestral amino acid sequences.

Pupko T, Pe'er I, Shamir R, Graur D. Pupko T, et al. Mol Biol Evol. 2000 Jun;17(6):890-6. doi: 10.1093/oxfordjournals.molbev.a026369. Mol Biol Evol. 2000. PMID: 10833195

7

Advanced computational techniques for re-sequencing DNA with polymerase signaling assay arrays.

Pe'er I, Arbili N, Liu Y, Enck C, Gelfand CA, Shamir R. Pe'er I, et al. Nucleic Acids Res. 2003 Oct 1;31(19):5667-75. doi: 10.1093/nar/gkg757. Nucleic Acids Res. 2003. PMID: 14500830 Free PMC article.

8

Computational problems in perfect phylogeny haplotyping: typing without calling the allele.

Barzuza T, Beckmann JS, Shamir R, Pe'er I. Barzuza T, et al. IEEE/ACM Trans Comput Biol Bioinform. 2008 Jan-Mar;5(1):101-9. doi: 10.1109/TCBB.2007.1063. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18245879

9

Typing without calling the allele: a strategy for inferring SNP haplotypes.

Barzuza T, Beckmann JS, Shamir R, Pe'er I. Barzuza T, et al. Eur J Hum Genet. 2005 Aug;13(8):898-901. doi: 10.1038/sj.ejhg.5201440. Eur J Hum Genet. 2005. PMID: 15900311 No abstract available.

10

A structural EM algorithm for phylogenetic inference.

Friedman N, Ninio M, Pe'er I, Pupko T. Friedman N, et al. J Comput Biol. 2002;9(2):331-53. doi: 10.1089/10665270252935494. J Comput Biol. 2002. PMID: 12015885

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