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A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms.
Sachidanandam R, Weissman D, Schmidt SC, Kakol JM, Stein LD, Marth G, Sherry S, Mullikin JC, Mortimore BJ, Willey DL, Hunt SE, Cole CG, Coggill PC, Rice CM, Ning Z, Rogers J, Bentley DR, Kwok PY, Mardis ER, Yeh RT, Schultz B, Cook L, Davenport R, Dante M, Fulton L, Hillier L, Waterston RH, McPherson JD, Gilman B, Schaffner S, Van Etten WJ, Reich D, Higgins J, Daly MJ, Blumenstiel B, Baldwin J, Stange-Thomann N, Zody MC, Linton L, Lander ES, Altshuler D; International SNP Map Working Group. Sachidanandam R, et al. Among authors: davenport r. Nature. 2001 Feb 15;409(6822):928-33. doi: 10.1038/35057149. Nature. 2001. PMID: 11237013
Sequence variations in the public human genome data reflect a bottlenecked population history.
Marth G, Schuler G, Yeh R, Davenport R, Agarwala R, Church D, Wheelan S, Baker J, Ward M, Kholodov M, Phan L, Czabarka E, Murvai J, Cutler D, Wooding S, Rogers A, Chakravarti A, Harpending HC, Kwok PY, Sherry ST. Marth G, et al. Among authors: davenport r. Proc Natl Acad Sci U S A. 2003 Jan 7;100(1):376-81. doi: 10.1073/pnas.222673099. Epub 2002 Dec 26. Proc Natl Acad Sci U S A. 2003. PMID: 12502794 Free PMC article.
The maize W22 genome provides a foundation for functional genomics and transposon biology.
Springer NM, Anderson SN, Andorf CM, Ahern KR, Bai F, Barad O, Barbazuk WB, Bass HW, Baruch K, Ben-Zvi G, Buckler ES, Bukowski R, Campbell MS, Cannon EKS, Chomet P, Dawe RK, Davenport R, Dooner HK, Du LH, Du C, Easterling KA, Gault C, Guan JC, Hunter CT, Jander G, Jiao Y, Koch KE, Kol G, Köllner TG, Kudo T, Li Q, Lu F, Mayfield-Jones D, Mei W, McCarty DR, Noshay JM, Portwood JL 2nd, Ronen G, Settles AM, Shem-Tov D, Shi J, Soifer I, Stein JC, Stitzer MC, Suzuki M, Vera DL, Vollbrecht E, Vrebalov JT, Ware D, Wei S, Wimalanathan K, Woodhouse MR, Xiong W, Brutnell TP. Springer NM, et al. Among authors: davenport r. Nat Genet. 2018 Sep;50(9):1282-1288. doi: 10.1038/s41588-018-0158-0. Epub 2018 Jul 30. Nat Genet. 2018. PMID: 30061736
Population genomics of the eastern cottonwood (Populus deltoides).
Fahrenkrog AM, Neves LG, Resende MFR Jr, Dervinis C, Davenport R, Barbazuk WB, Kirst M. Fahrenkrog AM, et al. Among authors: davenport r. Ecol Evol. 2017 Oct 10;7(22):9426-9440. doi: 10.1002/ece3.3466. eCollection 2017 Nov. Ecol Evol. 2017. PMID: 29187979 Free PMC article.
Jasmonate induced alternative splicing responses in Arabidopsis.
Feng G, Yoo MJ, Davenport R, Boatwright JL, Koh J, Chen S, Barbazuk WB. Feng G, et al. Among authors: davenport r. Plant Direct. 2020 Aug 26;4(8):e00245. doi: 10.1002/pld3.245. eCollection 2020 Aug. Plant Direct. 2020. PMID: 32875268 Free PMC article.
Genetic analysis of human RNA binding motif protein 48 (RBM48) reveals an essential role in U12-type intron splicing.
Siebert AE, Corll J, Paige Gronevelt J, Levine L, Hobbs LM, Kenney C, Powell CLE, Battistuzzi FU, Davenport R, Mark Settles A, Brad Barbazuk W, Westrick RJ, Madlambayan GJ, Lal S. Siebert AE, et al. Among authors: davenport r. Genetics. 2022 Sep 30;222(2):iyac129. doi: 10.1093/genetics/iyac129. Genetics. 2022. PMID: 36040194 Free PMC article.
749 results