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Page 1
Timing the ancestor of the HIV-1 pandemic strains.
Korber B, Muldoon M, Theiler J, Gao F, Gupta R, Lapedes A, Hahn BH, Wolinsky S, Bhattacharya T. Korber B, et al. Among authors: gao f. Science. 2000 Jun 9;288(5472):1789-96. doi: 10.1126/science.288.5472.1789. Science. 2000. PMID: 10846155
Diversity considerations in HIV-1 vaccine selection.
Gaschen B, Taylor J, Yusim K, Foley B, Gao F, Lang D, Novitsky V, Haynes B, Hahn BH, Bhattacharya T, Korber B. Gaschen B, et al. Among authors: gao f. Science. 2002 Jun 28;296(5577):2354-60. doi: 10.1126/science.1070441. Science. 2002. PMID: 12089434 Review.
Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection.
Song H, Giorgi EE, Ganusov VV, Cai F, Athreya G, Yoon H, Carja O, Hora B, Hraber P, Romero-Severson E, Jiang C, Li X, Wang S, Li H, Salazar-Gonzalez JF, Salazar MG, Goonetilleke N, Keele BF, Montefiori DC, Cohen MS, Shaw GM, Hahn BH, McMichael AJ, Haynes BF, Korber B, Bhattacharya T, Gao F. Song H, et al. Among authors: gao f. Nat Commun. 2018 May 15;9(1):1928. doi: 10.1038/s41467-018-04217-5. Nat Commun. 2018. PMID: 29765018 Free PMC article.
HIV-1 nomenclature proposal.
Robertson DL, Anderson JP, Bradac JA, Carr JK, Foley B, Funkhouser RK, Gao F, Hahn BH, Kalish ML, Kuiken C, Learn GH, Leitner T, McCutchan F, Osmanov S, Peeters M, Pieniazek D, Salminen M, Sharp PM, Wolinsky S, Korber B. Robertson DL, et al. Among authors: gao f. Science. 2000 Apr 7;288(5463):55-6. doi: 10.1126/science.288.5463.55d. Science. 2000. PMID: 10766634 No abstract available.
Genetic signatures in the envelope glycoproteins of HIV-1 that associate with broadly neutralizing antibodies.
Gnanakaran S, Daniels MG, Bhattacharya T, Lapedes AS, Sethi A, Li M, Tang H, Greene K, Gao H, Haynes BF, Cohen MS, Shaw GM, Seaman MS, Kumar A, Gao F, Montefiori DC, Korber B. Gnanakaran S, et al. Among authors: gao f, gao h. PLoS Comput Biol. 2010 Oct 7;6(10):e1000955. doi: 10.1371/journal.pcbi.1000955. PLoS Comput Biol. 2010. PMID: 20949103 Free PMC article.
Recurrent signature patterns in HIV-1 B clade envelope glycoproteins associated with either early or chronic infections.
Gnanakaran S, Bhattacharya T, Daniels M, Keele BF, Hraber PT, Lapedes AS, Shen T, Gaschen B, Krishnamoorthy M, Li H, Decker JM, Salazar-Gonzalez JF, Wang S, Jiang C, Gao F, Swanstrom R, Anderson JA, Ping LH, Cohen MS, Markowitz M, Goepfert PA, Saag MS, Eron JJ, Hicks CB, Blattner WA, Tomaras GD, Asmal M, Letvin NL, Gilbert PB, Decamp AC, Magaret CA, Schief WR, Ban YE, Zhang M, Soderberg KA, Sodroski JG, Haynes BF, Shaw GM, Hahn BH, Korber B. Gnanakaran S, et al. Among authors: gao f. PLoS Pathog. 2011 Sep;7(9):e1002209. doi: 10.1371/journal.ppat.1002209. Epub 2011 Sep 29. PLoS Pathog. 2011. PMID: 21980282 Free PMC article. Clinical Trial.
Impact of clade, geography, and age of the epidemic on HIV-1 neutralization by antibodies.
Hraber P, Korber BT, Lapedes AS, Bailer RT, Seaman MS, Gao H, Greene KM, McCutchan F, Williamson C, Kim JH, Tovanabutra S, Hahn BH, Swanstrom R, Thomson MM, Gao F, Harris L, Giorgi E, Hengartner N, Bhattacharya T, Mascola JR, Montefiori DC. Hraber P, et al. Among authors: gao f, gao h. J Virol. 2014 Nov;88(21):12623-43. doi: 10.1128/JVI.01705-14. Epub 2014 Aug 20. J Virol. 2014. PMID: 25142591 Free PMC article.
Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants.
Hraber P, Korber B, Wagh K, Giorgi EE, Bhattacharya T, Gnanakaran S, Lapedes AS, Learn GH, Kreider EF, Li Y, Shaw GM, Hahn BH, Montefiori DC, Alam SM, Bonsignori M, Moody MA, Liao HX, Gao F, Haynes BF. Hraber P, et al. Among authors: gao f. Viruses. 2015 Oct 21;7(10):5443-75. doi: 10.3390/v7102881. Viruses. 2015. PMID: 26506369 Free PMC article.
Hybrid origin of SIV in chimpanzees.
Bailes E, Gao F, Bibollet-Ruche F, Courgnaud V, Peeters M, Marx PA, Hahn BH, Sharp PM. Bailes E, et al. Among authors: gao f. Science. 2003 Jun 13;300(5626):1713. doi: 10.1126/science.1080657. Science. 2003. PMID: 12805540 No abstract available.
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