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Page 1
Interpolated Markov models for eukaryotic gene finding.
Salzberg SL, Pertea M, Delcher AL, Gardner MJ, Tettelin H. Salzberg SL, et al. Genomics. 1999 Jul 1;59(1):24-31. doi: 10.1006/geno.1999.5854. Genomics. 1999. PMID: 10395796 Free article.
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae.
Tettelin H, Nelson KE, Paulsen IT, Eisen JA, Read TD, Peterson S, Heidelberg J, DeBoy RT, Haft DH, Dodson RJ, Durkin AS, Gwinn M, Kolonay JF, Nelson WC, Peterson JD, Umayam LA, White O, Salzberg SL, Lewis MR, Radune D, Holtzapple E, Khouri H, Wolf AM, Utterback TR, Hansen CL, McDonald LA, Feldblyum TV, Angiuoli S, Dickinson T, Hickey EK, Holt IE, Loftus BJ, Yang F, Smith HO, Venter JC, Dougherty BA, Morrison DA, Hollingshead SK, Fraser CM. Tettelin H, et al. Among authors: salzberg sl. Science. 2001 Jul 20;293(5529):498-506. doi: 10.1126/science.1061217. Science. 2001. PMID: 11463916
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.
Read TD, Peterson SN, Tourasse N, Baillie LW, Paulsen IT, Nelson KE, Tettelin H, Fouts DE, Eisen JA, Gill SR, Holtzapple EK, Okstad OA, Helgason E, Rilstone J, Wu M, Kolonay JF, Beanan MJ, Dodson RJ, Brinkac LM, Gwinn M, DeBoy RT, Madpu R, Daugherty SC, Durkin AS, Haft DH, Nelson WC, Peterson JD, Pop M, Khouri HM, Radune D, Benton JL, Mahamoud Y, Jiang L, Hance IR, Weidman JF, Berry KJ, Plaut RD, Wolf AM, Watkins KL, Nierman WC, Hazen A, Cline R, Redmond C, Thwaite JE, White O, Salzberg SL, Thomason B, Friedlander AM, Koehler TM, Hanna PC, Kolstø AB, Fraser CM. Read TD, et al. Among authors: salzberg sl. Nature. 2003 May 1;423(6935):81-6. doi: 10.1038/nature01586. Nature. 2003. PMID: 12721629 Free article.
Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).
Ward N, Larsen Ø, Sakwa J, Bruseth L, Khouri H, Durkin AS, Dimitrov G, Jiang L, Scanlan D, Kang KH, Lewis M, Nelson KE, Methé B, Wu M, Heidelberg JF, Paulsen IT, Fouts D, Ravel J, Tettelin H, Ren Q, Read T, DeBoy RT, Seshadri R, Salzberg SL, Jensen HB, Birkeland NK, Nelson WC, Dodson RJ, Grindhaug SH, Holt I, Eidhammer I, Jonasen I, Vanaken S, Utterback T, Feldblyum TV, Fraser CM, Lillehaug JR, Eisen JA. Ward N, et al. Among authors: salzberg sl. PLoS Biol. 2004 Oct;2(10):e303. doi: 10.1371/journal.pbio.0020303. Epub 2004 Sep 21. PLoS Biol. 2004. PMID: 15383840 Free PMC article.
Alignment of whole genomes.
Delcher AL, Kasif S, Fleischmann RD, Peterson J, White O, Salzberg SL. Delcher AL, et al. Among authors: salzberg sl. Nucleic Acids Res. 1999 Jun 1;27(11):2369-76. doi: 10.1093/nar/27.11.2369. Nucleic Acids Res. 1999. PMID: 10325427 Free PMC article.
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.
Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, DeBoy R, Dodson R, Gwinn M, Haft D, Hickey E, Kolonay JF, Nelson WC, Umayam LA, Ermolaeva M, Salzberg SL, Delcher A, Utterback T, Weidman J, Khouri H, Gill J, Mikula A, Bishai W, Jacobs WR Jr, Venter JC, Fraser CM. Fleischmann RD, et al. Among authors: salzberg sl. J Bacteriol. 2002 Oct;184(19):5479-90. doi: 10.1128/JB.184.19.5479-5490.2002. J Bacteriol. 2002. PMID: 12218036 Free PMC article.
Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39.
Read TD, Brunham RC, Shen C, Gill SR, Heidelberg JF, White O, Hickey EK, Peterson J, Utterback T, Berry K, Bass S, Linher K, Weidman J, Khouri H, Craven B, Bowman C, Dodson R, Gwinn M, Nelson W, DeBoy R, Kolonay J, McClarty G, Salzberg SL, Eisen J, Fraser CM. Read TD, et al. Among authors: salzberg sl. Nucleic Acids Res. 2000 Mar 15;28(6):1397-406. doi: 10.1093/nar/28.6.1397. Nucleic Acids Res. 2000. PMID: 10684935 Free PMC article.
Complete genome sequence of Neisseria meningitidis serogroup B strain MC58.
Tettelin H, Saunders NJ, Heidelberg J, Jeffries AC, Nelson KE, Eisen JA, Ketchum KA, Hood DW, Peden JF, Dodson RJ, Nelson WC, Gwinn ML, DeBoy R, Peterson JD, Hickey EK, Haft DH, Salzberg SL, White O, Fleischmann RD, Dougherty BA, Mason T, Ciecko A, Parksey DS, Blair E, Cittone H, Clark EB, Cotton MD, Utterback TR, Khouri H, Qin H, Vamathevan J, Gill J, Scarlato V, Masignani V, Pizza M, Grandi G, Sun L, Smith HO, Fraser CM, Moxon ER, Rappuoli R, Venter JC. Tettelin H, et al. Among authors: salzberg sl. Science. 2000 Mar 10;287(5459):1809-15. doi: 10.1126/science.287.5459.1809. Science. 2000. PMID: 10710307
401 results