Differential display PCR reveals induction of immediate early genes by vasoactive intestinal peptide in PC12 cells

Ann N Y Acad Sci. 1998 Dec 11:865:181-8. doi: 10.1111/j.1749-6632.1998.tb11177.x.

Abstract

In order to identify genes regulated by vasoactive intestinal peptide, we performed differential display PCR as originally described by Liang and Pardee. Messenger RNA of PC12 cells treated with vasoactive intestinal peptide or nerve growth factor for one hour was reverse transcribed and amplified using different sets of oligo-dT and random primers. Radioactively labeled PCR products were displayed on polyacrylamide gels and candidate cDNAs extracted from the gel, re-amplified by PCR, cloned, and sequenced. Differential expression was verified by RT-PCR applying sets of specific primers obtained from the sequence. The specificity of the PCR product was confirmed by Southern blotting using a radioactively labeled internal primer and semi-quantitative densitometric analysis. This rapid and sensitive protocol led to the isolation of two immediate early genes, pip92 and PC4, known to be increased on mRNA level by nerve growth factor in PC 12 cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Cloning, Molecular
  • DNA, Complementary
  • Gene Expression Regulation, Neoplastic / drug effects
  • Gene Expression Regulation, Neoplastic / physiology*
  • Genes, Immediate-Early / drug effects*
  • Genes, Tumor Suppressor
  • Immediate-Early Proteins / genetics*
  • Membrane Proteins / genetics*
  • Molecular Sequence Data
  • PC12 Cells
  • Proteins / genetics*
  • RNA, Messenger / genetics
  • Rats
  • Reverse Transcriptase Polymerase Chain Reaction / methods
  • Sequence Alignment
  • Sequence Homology, Nucleic Acid
  • Transcription, Genetic / drug effects*
  • Vasoactive Intestinal Peptide / pharmacology*

Substances

  • DNA, Complementary
  • Ifrd1 protein, mouse
  • Ifrd1 protein, rat
  • Immediate-Early Proteins
  • Membrane Proteins
  • Proteins
  • RNA, Messenger
  • pip92 protein, rat
  • Vasoactive Intestinal Peptide