Alternative splicing and hypermutation of a nonproductively rearranged TCR alpha-chain in a T cell hybridoma

J Immunol. 1999 Jan 15;162(2):871-7.

Abstract

Like Ig genes, TCR genes are formed by somatic rearrangements of noncontiguous genomic V, J, and C regions. Unlike Ig genes, somatic hypermutation of TCR V regions is an infrequent event. We describe the occurrence of spontaneous hypermutation in a nonproductively rearranged TCR alpha-chain gene in a clonal T cell hybridoma that had lost its productively rearranged alpha-chain. The mutating hybridoma was eventually supplanted in culture by a nonmutating variant that had restored an open reading frame in the nonproductively rearranged TCR alpha-chain through the use of cryptic splice sites in the V alpha region. Evidence is presented for the presence of cDNA reverse transcripts of the TCR alpha-chain within the hybridoma, suggesting a role for reverse transcriptase in the generation of mutations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing / immunology*
  • Animals
  • Base Sequence
  • Cell Separation
  • Cloning, Molecular
  • Gene Conversion / immunology
  • Gene Rearrangement, alpha-Chain T-Cell Antigen Receptor*
  • Gene Rearrangement, beta-Chain T-Cell Antigen Receptor
  • Hybridomas / chemistry
  • Hybridomas / enzymology
  • Hybridomas / metabolism*
  • Introns / immunology
  • Mice
  • Mice, Transgenic
  • Molecular Sequence Data
  • Mutation / immunology*
  • Pedigree
  • Polymerase Chain Reaction
  • RNA-Directed DNA Polymerase / metabolism
  • Receptors, Antigen, T-Cell, alpha-beta / genetics
  • T-Lymphocyte Subsets / chemistry
  • T-Lymphocyte Subsets / enzymology
  • T-Lymphocyte Subsets / metabolism*

Substances

  • Receptors, Antigen, T-Cell, alpha-beta
  • RNA-Directed DNA Polymerase