The gene encoding the C gamma catalytic subunit of cAMP-dependent protein kinase is a transcribed retroposon

Genomics. 1998 Apr 15;49(2):290-7. doi: 10.1006/geno.1998.5240.

Abstract

Three different catalytic isoforms of cAMP-dependent protein kinase have been identified (C alpha, C beta, and C gamma). We report the cloning and characterization of the human and rhesus monkey genes encoding the testis-specific C gamma subunit. The human C gamma gene is intronless with an open reading frame similar to the previously published cDNA sequence. The 3' and 5' flanking regions share high similarity with the C alpha nontranslated regions (82%) also outside the regions corresponding to the C gamma cDNA. The human gene is flanked by an Alu-related sequence in the 5'-end and there are insertions of two Alu-related sequences in the 3' nontranslated region. The observation that the C gamma gene is intronless and colinear with C alpha mRNA, together with the presence of remnants of a poly(A) tail and flanking direct repeats, indicates that the C gamma gene is a C alpha-derived retroposon. The 5' flanking region of this gene has a high G/C content and a putative TATA box situated at -138 compared to the translation initiation codon. Cloning and sequencing of a partial C gamma rhesus monkey gene demonstrate conservation of the sequence in primates. Northern analysis on isolated and fractionated human germ cells of testes from normal and estrogen-treated individuals demonstrates that the C gamma gene is expressed only in germ cells in the human testis. Our results indicate that the C gamma gene is a retroposon specifically transcribed in primate testicular germ cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cloning, Molecular
  • Cyclic AMP-Dependent Protein Kinases / genetics*
  • Humans
  • Isoenzymes / genetics
  • Macaca mulatta
  • Male
  • Molecular Sequence Data
  • Retroelements / genetics*
  • Sequence Analysis, DNA
  • Testis / enzymology
  • Transcription, Genetic

Substances

  • Isoenzymes
  • Retroelements
  • Cyclic AMP-Dependent Protein Kinases

Associated data

  • GENBANK/AJ001597
  • GENBANK/AJ001927