Genomic semi-automated cycle sequencing as a sensitive screening technique for p53 mutations in frozen tumor samples

Oncol Rep. 1998 Jan-Feb;5(1):65-8. doi: 10.3892/or.5.1.65.

Abstract

Single-strand conformational polymorphism (SSCP) is the most widely used method for p53 gene mutation screening. Nucleotide sequence analysis is considered more sensitive for detection of mutations. We established a genomic semi-automated cycle sequencing protocol suitable for p53 gene mutation screening. The technique was applied to 44 SSCP-negative frozen ovarian cancer samples: Eleven mutations (11/44, 25%) were found, 6 point missense mutations, 3 silent point mutations, 1 nonsense mutation and 1 single-base deletion. Heterozygous mutations were readily detectable. Genomic semi-automated cycle sequencing is a sensitive, time-effective screening method requiring only small amounts of tumor tissue.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Substitution
  • Automation
  • Codon, Nonsense
  • Female
  • Frameshift Mutation
  • Genes, p53*
  • Humans
  • Mutation*
  • Ovarian Neoplasms / genetics*
  • Ovarian Neoplasms / pathology*
  • Point Mutation
  • Polymerase Chain Reaction / methods
  • Polymorphism, Single-Stranded Conformational*
  • Sensitivity and Specificity
  • Tumor Suppressor Protein p53 / chemistry
  • Tumor Suppressor Protein p53 / genetics

Substances

  • Codon, Nonsense
  • Tumor Suppressor Protein p53