Secondary structure, stability and tetramerisation of recombinant K(V)1.1 potassium channel cytoplasmic N-terminal fragment

Biochim Biophys Acta. 1997 Aug 15;1341(1):71-8. doi: 10.1016/s0167-4838(97)00062-9.

Abstract

The recombinant N-terminal fragment (amino acids 14-162) of a tetrameric voltage-gated potassium channel (K(V)1.1) has been studied using spectroscopic techniques. Evidence is presented that it forms a tetramer in aqueous solution, whereas when solubilised in 1% Triton X-100 it remains monomeric. The secondary structure content of both monomeric and tetrameric K(V)1.1 N-terminal fragment has been estimated from FTIR and CD spectroscopy to be 20-25% alpha-helix, 20-25% beta-sheet, 20% turns and 30-40% random coil. Solubilisation of the protein in detergent is shown by hydrogen-deuterium exchange analysis to alter tertiary structure rather than secondary structure and this may be the determining factor in tetramerisation ability. Using molecular modelling we propose a supersecondary structure consisting of two structural domains.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Circular Dichroism
  • Cloning, Molecular
  • Cytoplasm / chemistry
  • Kv1.1 Potassium Channel
  • Molecular Sequence Data
  • Octoxynol
  • Potassium Channels / chemistry*
  • Potassium Channels, Voltage-Gated*
  • Protein Structure, Secondary*
  • Recombinant Proteins / chemistry
  • Spectroscopy, Fourier Transform Infrared

Substances

  • Potassium Channels
  • Potassium Channels, Voltage-Gated
  • Recombinant Proteins
  • Kv1.1 Potassium Channel
  • Octoxynol