Amino acid sequence and three-dimensional structure of the Tn-specific isolectin B4 from Vicia villosa

FEBS Lett. 1997 Jul 21;412(1):190-6. doi: 10.1016/s0014-5793(97)00677-7.

Abstract

The partial amino acid sequence of the tetrameric isolectin B4 from Vicia villosa seeds has been determined by peptide analysis, and its three-dimensional structure solved by molecular replacement techniques and refined at 2.9 A resolution to a crystallographic R-factor of 21%. Each subunit displays the thirteen-stranded beta-barrel topology characteristic of legume lectins. The amino acid residues involved in metal- and sugar-binding are similar to those of other GalNAc-specific lectins, indicating that residues outside the carbohydrate-binding pocket modulate the affinity for the Tn glycopeptide. Isolectin B4 displays an unusual quaternary structure, probably due to protein glycosylation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antigens, Tumor-Associated, Carbohydrate / metabolism*
  • Computer Simulation
  • Crystallography, X-Ray
  • Fabaceae / chemistry*
  • Lectins / chemistry*
  • Lectins / metabolism
  • Macromolecular Substances
  • Models, Molecular
  • Molecular Sequence Data
  • Molecular Structure
  • Plant Lectins
  • Plants, Medicinal*
  • Protein Structure, Secondary

Substances

  • Antigens, Tumor-Associated, Carbohydrate
  • Lectins
  • Macromolecular Substances
  • Plant Lectins
  • Tn antigen

Associated data

  • PDB/1LTE
  • PDB/2LTN