HLA-B*27 typing by PCR-restriction fragment length polymorphism

Tissue Antigens. 1997 Mar;49(3 Pt 1):283-6. doi: 10.1111/j.1399-0039.1997.tb02754.x.

Abstract

In this study we describe the use of PCR-RFLP for genotyping HLA-B*27. A 557 bp fragment from HLA-B locus is amplified and subjected to digestion with StyI. The presence of B*27 is detected on electrophoresis by the appearance of 431 + 126 bp pattern. The same pattern could be obtained only for the very infrequent allele B*7301. However, this allele was not amplified in the B73 sample tested with the primers and conditions used in this study. Nevertheless, we have designed two PCR-RFLP approaches for separating these alleles. The PCR-RFLP method was tested on a panel of forty-three cell lines and applied to fifty spondyloarthritic patients and one-hundred-eighty healthy subjects. Given its robustness, technical simplicity and cost-effectiveness, we think that this method can be incorporated for routine use in most laboratories.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Genotype
  • HLA-B27 Antigen / classification*
  • HLA-B27 Antigen / genetics*
  • Histocompatibility Testing
  • Humans
  • Polymerase Chain Reaction*
  • Polymorphism, Restriction Fragment Length*

Substances

  • HLA-B27 Antigen