The translational function of nucleotide C1054 in the small subunit rRNA is conserved throughout evolution: genetic evidence in yeast

Proc Natl Acad Sci U S A. 1996 Mar 19;93(6):2517-22. doi: 10.1073/pnas.93.6.2517.

Abstract

Mutations at position C1054 of 16S rRNA have previously been shown to cause translational suppression in Escherichia coli. To examine the effects of similar mutations in a eukaryote, all three possible base substitutions and a base deletion were generated at the position of Saccharomyces cerevisiae 18S rRNA corresponding to E. coli C1054. In yeast, as in E. coli, both C1054A (rdn-1A) and C1054G (rdn-1G) caused dominant nonsense suppression. Yeast C1054U (rdn-1T) was a recessive antisuppressor, while yeast C1054-delta (rdn-1delta) led to recessive lethality. Both C1054U and two previously described yeast 18S rRNA antisuppressor mutations, G517A (rdn-2) and U912C (rdn-4), inhibited codon-nonspecific suppression caused by mutations in eukaryotic release factors, sup45 and sup35. However, among these only C1054U inhibited UAA-specific suppressions caused by a UAA-decoding mutant tRNA-Gln (SLT3). Our data implicate eukaryotic C1054 in translational termination, thus suggesting that its function is conserved throughout evolution despite the divergence of nearby nucleotide sequences.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • DNA Primers / chemistry
  • Escherichia coli / genetics
  • Genes, Suppressor
  • Molecular Sequence Data
  • Protein Biosynthesis*
  • RNA, Fungal / chemistry
  • RNA, Messenger / genetics
  • RNA, Ribosomal, 18S / chemistry*
  • RNA, Transfer, Gln / genetics
  • Saccharomyces cerevisiae
  • Structure-Activity Relationship

Substances

  • DNA Primers
  • RNA, Fungal
  • RNA, Messenger
  • RNA, Ribosomal, 18S
  • RNA, Transfer, Gln