Photochemistry, photophysics, and mechanism of pyrimidine dimer repair by DNA photolyase

Photochem Photobiol. 1993 May;57(5):895-904. doi: 10.1111/j.1751-1097.1993.tb09232.x.

Abstract

DNA photolyases photorepair pyrimidine dimers (Pyr < > Pyr) in DNA as well as RNA and thus reverse the harmful effects of UV-A (320-400 nm) and UV-B (280-320 nm) radiations. Photolyases from various organisms have been found to contain two noncovalently bound cofactors; one is a fully reduced flavin adenine dinucleotide (FADH-) and the other, commonly known as second chromophore, is either methenyltetrahydrofolate (MTHF) or 8-hydroxydeazaflavin (8-HDF). The second chromophore in photolyase is a light-harvesting molecule that absorbs mostly in the near-UV and visible wavelengths (300-500 nm) with its high extinction coefficient. The second chromophore then transfers its excitation energy to the FADH-. Subsequently, the photoexcited FADH- transfers an electron to the Pyr < > Pyr generating a dimer radical anion (Pyr < > Pyr.-) and a neutral flavin radical (FADH.). The Pyr < > Pyr.- is very unstable and undergoes spontaneous splitting followed by a back electron transfer to the FADH.. In addition to the main catalytic cofactor FADH-, a Trp (Trp277 in Escherichia coli) in apophotolyase, independent of other chromophores, also functions as a sensitizer to repair Pyr < > Pyr by direct electron transfer.

Publication types

  • Review

MeSH terms

  • Bacteria / enzymology
  • Bacteria / genetics
  • Bacteria / radiation effects
  • DNA / radiation effects*
  • DNA Damage
  • DNA Repair*
  • Deoxyribodipyrimidine Photo-Lyase / metabolism*
  • Photochemistry
  • Pyrimidine Dimers / metabolism*
  • Ultraviolet Rays*

Substances

  • Pyrimidine Dimers
  • DNA
  • Deoxyribodipyrimidine Photo-Lyase