Improved PCR sensitivity for direct genotyping of Chlamydia trachomatis serovars by using a nested PCR

J Clin Microbiol. 1994 Feb;32(2):528-30. doi: 10.1128/jcm.32.2.528-530.1994.

Abstract

Successful amplification of omp1 DNA by PCR is crucial in the genotyping of Chlamydia trachomatis when directly performed with clinical samples (J. Lan, J. M. M. Walboomers, R. Roosendaal, G. J. van Doornum, D. M. McLaren, C. J. L. M. Meijer, and A. J. C. van den Brule, J. Clin. Microbiol. 31:1060-1065, 1993). Several primers flanking the four variable domains of the omp1 gene were selected and tested for sensitivity in several nested PCRs with serial dilutions of serovar G. The optimal sensitivity obtained was 0.1 to 0.01 inclusion-forming units, similar to that obtained in the C. trachomatis plasmid PCR. With this approach, any C. trachomatis PCR-positive sample can be typed.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Typing Techniques
  • Base Sequence
  • Chlamydia Infections / microbiology
  • Chlamydia trachomatis / classification
  • Chlamydia trachomatis / genetics*
  • Chlamydia trachomatis / isolation & purification
  • DNA Primers / genetics
  • Female
  • Genes, Bacterial
  • Genotype
  • Humans
  • Molecular Sequence Data
  • Polymerase Chain Reaction / methods*
  • Polymerase Chain Reaction / statistics & numerical data
  • Porins*
  • Sensitivity and Specificity
  • Serotyping

Substances

  • Bacterial Outer Membrane Proteins
  • DNA Primers
  • Porins
  • omp1 protein, Chlamydia trachomatis