Site-directed mutagenesis of Thermus thermophilus elongation factor Tu. Replacement of His85, Asp81 and Arg300

Eur J Biochem. 1995 May 1;229(3):596-604. doi: 10.1111/j.1432-1033.1995.tb20503.x.

Abstract

His85 in Thermus thermophilus elongation factor Tu (EF-Tu) was replaced by glutamine, leucine and glycine residues, leading to [H85Q]EF-Tu, [H85L] EF-Tu and [H85G]EF-Tu, respectively. Asp81 was replaced by alanine leading to [D81A]EF-Tu, and replacement of Arg300 provided [R300I]EF-Tu. Glycine in position 85 of domain I induces a protease-sensitive site in domain II and causes complete protein degradation in vivo. A similar effect was observed when Asp81 was replaced by alanine or Arg300 by isoleucine. Degradation is probably due to disturbed interactions between the domains of EF-Tu.GTP, inducing a protease-sensitive cleavage site in domain II. [H85Q]EF-Tu, which can be effectively overproduced in Escherichia coli, is slower in poly(U)-dependent poly(Phe) synthesis, has lower affinity to aminoacyl-tRNA but shows only a slightly reduced rate of intrinsic GTP hydrolysis compared to the native protein. The GTPase of this protein variant is not efficiently stimulated by aminoacyl-tRNA and ribosomes. The slow GTPase of [H85Q]EF-Tu increases the fidelity of translation as measured by leucine incorporation into poly(Phe) in in vitro poly(U)-dependent ribosomal translation. Replacement of His85 in T. thermophilus EF-Tu by leucine completely deactivates the GTPase activity but does not substantially influence the aminoacyl-tRNA binding. [H85L]EF-Tu is inactive in poly(U)-dependent poly(Phe)-synthesis. The rate of nucleotide dissociation is highest for [H85L]EF-Tu, followed by [H85Q]EF-Tu and native T. thermophilus EF-Tu. Mutation of His85, a residue which is not directly involved in the nucleotide binding, thus influences the interaction of EF-Tu domains, nucleotide binding and the efficiency and rate of GTPase activity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Arginine*
  • Aspartic Acid*
  • Base Sequence
  • DNA Primers / chemistry
  • Escherichia coli / genetics
  • GTP Phosphohydrolase-Linked Elongation Factors / metabolism
  • Gene Expression
  • Histidine*
  • Hydrolysis
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed*
  • Oligodeoxyribonucleotides / chemistry
  • Peptide Elongation Factor Tu / chemistry
  • Peptide Elongation Factor Tu / genetics
  • Peptide Elongation Factor Tu / physiology*
  • Protein Structure, Tertiary
  • RNA, Transfer, Amino Acyl / metabolism
  • Structure-Activity Relationship
  • Thermus thermophilus / genetics
  • Thermus thermophilus / metabolism*

Substances

  • DNA Primers
  • Oligodeoxyribonucleotides
  • RNA, Transfer, Amino Acyl
  • Aspartic Acid
  • Histidine
  • Arginine
  • GTP Phosphohydrolase-Linked Elongation Factors
  • Peptide Elongation Factor Tu