Deformable multi-level feature network applied to nucleus segmentation

Front Microbiol. 2024 Dec 9:15:1519871. doi: 10.3389/fmicb.2024.1519871. eCollection 2024.

Abstract

Introduction: The nucleus plays a crucial role in medical diagnosis, and accurate nucleus segmentation is essential for disease assessment. However, existing methods have limitations in handling the diversity of nuclei and differences in staining conditions, restricting their practical application.

Methods: A novel deformable multi-level feature network (DMFNet) is proposed for nucleus segmentation. This network is based on convolutional neural network and divides feature processing and mask generation into two levels. At the feature level, deformable convolution is used to enhance feature extraction ability, and multi-scale features are integrated through a balanced feature pyramid. At the mask level, a one-stage framework is adopted to directly perform instance segmentation based on location.

Results: Experimental results on the MoNuSeg 2018 dataset show that the mean average precision (mAP) and mean average recall (mAR) of DMFNet reach 37.8% and 47.4% respectively, outperforming many current advanced methods. Ablation experiments verified the effectiveness of each module of the network.

Discussion: DMFNet provides an effective solution for nucleus segmentation and has important application value in medical image analysis.

Keywords: convolutional neural network; deep learning; deformable multi-level feature network; nucleus segmentation; pathology images.

Grants and funding

The author(s) declare financial support was received for the research, authorship, and/or publication of this article. This work was supported by the National Nature Science Foundation of China (62302279 and 62272283); the Natural Science Foundation of Shandong Province (ZR2021QF135); the “Young Innovation Team Program” of Shandong Provincial University (2022KJ250); New Twentieth Items of Universities in Jinan (2021GXRC049).