Genomic analysis and mechanisms exploration of a stress tolerance and high-yield pullulan producing strain

Front Genet. 2024 Sep 20:15:1469600. doi: 10.3389/fgene.2024.1469600. eCollection 2024.

Abstract

Pullulan is a kind of natural polymer, which is widely used in medicine and food because of its solubility, plasticity, edible, non-toxicity and good biocompatibility. It is of great significance to improve the yield of pullulan by genetic modification of microorganisms. It was previously reported that Aureobasidium melanogenum TN3-1 isolated from honey-comb could produce high-yield of pullulan, but the molecular mechanisms of its production of pullulan had not been completely solved. In this study, the reported strains of Aureobasidium spp. were further compared and analyzed at genome level. It was found that genome duplication and genome genetic variations might be the crucial factors for the high yield of pullulan and stress resistance. This particular phenotype may be the result of adaptive evolution, which can adapt to its environment through genetic variation and adaptive selection. In addition, the TN3-1 strain has a large genome, and the special regulatory sequences of its specific genes and promoters may ensure a unique characteristics. This study is a supplement of the previous studies, and provides basic data for the research of microbial genome modification in food and healthcare applications.

Keywords: Aureobasidium spp; adaptive evolution; comparative genomics; pullulan and biomedicine; secondary metabolites.

Grants and funding

The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work were supported by the Youth Project of National Natural Science Foundation of China (82301759), Youth Project of Shanxi Basic Research Program (20210302124561), and the “Double First-Class” technology creation special project - basic clinical cooperation (2C622024055).