Characterization and Anti-Biofilm Activity of Lytic Enterococcus Phage vB_Efs8_KEN04 against Clinical Isolates of Multidrug-Resistant Enterococcus faecalis in Kenya

Viruses. 2024 Aug 9;16(8):1275. doi: 10.3390/v16081275.

Abstract

Enterococcus faecalis (E. faecalis) is a growing cause of nosocomial and antibiotic-resistant infections. Treating drug-resistant E. faecalis requires novel approaches. The use of bacteriophages (phages) against multidrug-resistant (MDR) bacteria has recently garnered global attention. Biofilms play a vital role in E. faecalis pathogenesis as they enhance antibiotic resistance. Phages eliminate biofilms by producing lytic enzymes, including depolymerases. In this study, Enterococcus phage vB_Efs8_KEN04, isolated from a sewage treatment plant in Nairobi, Kenya, was tested against clinical strains of MDR E. faecalis. This phage had a broad host range against 100% (26/26) of MDR E. faecalis clinical isolates and cross-species activity against Enterococcus faecium. It was able to withstand acidic and alkaline conditions, from pH 3 to 11, as well as temperatures between -80 °C and 37 °C. It could inhibit and disrupt the biofilms of MDR E. faecalis. Its linear double-stranded DNA genome of 142,402 bp contains 238 coding sequences with a G + C content and coding gene density of 36.01% and 91.46%, respectively. Genomic analyses showed that phage vB_Efs8_KEN04 belongs to the genus Kochikohdavirus in the family Herelleviridae. It lacked antimicrobial resistance, virulence, and lysogeny genes, and its stability, broad host range, and cross-species lysis indicate strong potential for the treatment of Enterococcus infections.

Keywords: Enterococcus faecalis; bacteriophage; biofilm; genome; multidrug resistance; phage therapy.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Bacteriophages* / classification
  • Bacteriophages* / genetics
  • Bacteriophages* / isolation & purification
  • Bacteriophages* / physiology
  • Biofilms* / drug effects
  • Biofilms* / growth & development
  • Drug Resistance, Multiple, Bacterial*
  • Enterococcus faecalis* / drug effects
  • Enterococcus faecalis* / virology
  • Genome, Viral*
  • Gram-Positive Bacterial Infections / microbiology
  • Host Specificity*
  • Humans
  • Kenya
  • Sewage / virology

Substances

  • Anti-Bacterial Agents
  • Sewage