Cholesterol-rich lysosomes induced by respiratory syncytial virus promote viral replication by blocking autophagy flux

Nat Commun. 2024 Jul 26;15(1):6311. doi: 10.1038/s41467-024-50711-4.

Abstract

Respiratory syncytial virus (RSV) hijacks cholesterol or autophagy pathways to facilitate optimal replication. However, our understanding of the associated molecular mechanisms remains limited. Here, we show that RSV infection blocks cholesterol transport from lysosomes to the endoplasmic reticulum by downregulating the activity of lysosomal acid lipase, activates the SREBP2-LDLR axis, and promotes uptake and accumulation of exogenous cholesterol in lysosomes. High cholesterol levels impair the VAP-A-binding activity of ORP1L and promote the recruitment of dynein-dynactin, PLEKHM1, or HOPS VPS39 to Rab7-RILP, thereby facilitating minus-end transport of autophagosomes and autolysosome formation. Acidification inhibition and dysfunction of cholesterol-rich lysosomes impair autophagy flux by inhibiting autolysosome degradation, which promotes the accumulation of RSV fusion protein. RSV-F storage is nearly abolished after cholesterol depletion or knockdown of LDLR. Most importantly, the knockout of LDLR effectively inhibits RSV infection in vivo. These findings elucidate the molecular mechanism of how RSV co-regulates lysosomal cholesterol reprogramming and autophagy and reveal LDLR as a novel target for anti-RSV drug development.

MeSH terms

  • A549 Cells
  • Adaptor Proteins, Signal Transducing / genetics
  • Adaptor Proteins, Signal Transducing / metabolism
  • Animals
  • Autophagosomes / metabolism
  • Autophagy*
  • Cholesterol* / metabolism
  • Dynactin Complex / metabolism
  • Dyneins / metabolism
  • Endoplasmic Reticulum / metabolism
  • HeLa Cells
  • Humans
  • Lysosomes* / metabolism
  • Mice
  • Receptors, LDL* / genetics
  • Receptors, LDL* / metabolism
  • Respiratory Syncytial Virus Infections* / metabolism
  • Respiratory Syncytial Virus Infections* / virology
  • Respiratory Syncytial Virus, Human / physiology
  • Vesicular Transport Proteins* / genetics
  • Vesicular Transport Proteins* / metabolism
  • Viral Fusion Proteins / genetics
  • Viral Fusion Proteins / metabolism
  • Virus Replication*
  • rab GTP-Binding Proteins* / genetics
  • rab GTP-Binding Proteins* / metabolism
  • rab7 GTP-Binding Proteins*

Substances

  • Cholesterol
  • rab7 GTP-binding proteins, human
  • rab7 GTP-Binding Proteins
  • Receptors, LDL
  • Vesicular Transport Proteins
  • rab GTP-Binding Proteins
  • VAPA protein, human
  • RILP protein, human
  • Dynactin Complex
  • LDLR protein, human
  • Dyneins
  • Adaptor Proteins, Signal Transducing
  • Viral Fusion Proteins