The molecular basis underlying T cell specificity towards citrullinated epitopes presented by HLA-DR4

Nat Commun. 2024 Jul 23;15(1):6201. doi: 10.1038/s41467-024-50511-w.

Abstract

CD4+ T cells recognising citrullinated self-epitopes presented by HLA-DRB1 bearing the shared susceptibility epitope (SE) are implicated in rheumatoid arthritis (RA). However, the underlying T cell receptor (TCR) determinants of epitope specificity towards distinct citrullinated peptide antigens, including vimentin-64cit59-71 and α-enolase-15cit10-22 remain unclear. Using HLA-DR4-tetramers, we examine the T cell repertoire in HLA-DR4 transgenic mice and observe biased TRAV6 TCR gene usage across these two citrullinated epitopes which matches with TCR bias previously observed towards the fibrinogen β-74cit69-81 epitope. Moreover, shared TRAV26-1 gene usage is evident in four α-enolase-15cit10-22 reactive T cells in three human samples. Crystal structures of mouse TRAV6+ and human TRAV26-1+ TCR-HLA-DR4 complexes presenting vimentin-64cit59-71 and α-enolase-15cit10-22, respectively, show three-way interactions between the TCR, SE, citrulline, and the basis for the biased selection of TRAV genes. Position 2 of the citrullinated epitope is a key determinant underpinning TCR specificity. Accordingly, we provide a molecular basis of TCR specificity towards citrullinated epitopes.

MeSH terms

  • Animals
  • Arthritis, Rheumatoid* / genetics
  • Arthritis, Rheumatoid* / immunology
  • CD4-Positive T-Lymphocytes* / immunology
  • Citrullination
  • Citrulline / immunology
  • Citrulline / metabolism
  • Crystallography, X-Ray
  • Epitopes / immunology
  • Epitopes, T-Lymphocyte / immunology
  • HLA-DR4 Antigen* / genetics
  • HLA-DR4 Antigen* / immunology
  • Humans
  • Mice
  • Mice, Transgenic*
  • Phosphopyruvate Hydratase / genetics
  • Phosphopyruvate Hydratase / immunology
  • Phosphopyruvate Hydratase / metabolism
  • Receptors, Antigen, T-Cell / immunology
  • Receptors, Antigen, T-Cell / metabolism
  • Receptors, Antigen, T-Cell, alpha-beta / genetics
  • Receptors, Antigen, T-Cell, alpha-beta / immunology
  • Receptors, Antigen, T-Cell, alpha-beta / metabolism
  • Vimentin* / genetics
  • Vimentin* / immunology
  • Vimentin* / metabolism

Substances

  • HLA-DR4 Antigen
  • Vimentin
  • Phosphopyruvate Hydratase
  • Epitopes, T-Lymphocyte
  • Citrulline
  • Receptors, Antigen, T-Cell
  • Epitopes
  • Receptors, Antigen, T-Cell, alpha-beta