The archaeal highly thermostable GH35 family β-galactosidase DaβGal has a unique seven domain protein fold

FEBS J. 2024 Aug;291(16):3686-3705. doi: 10.1111/febs.17166. Epub 2024 Jun 2.

Abstract

The most extensively studied β-d-galactosidases (EC3.2.1.23) belonging to four glycoside hydrolase (GH) families 1, 2, 35, and 42 are widely distributed among Bacteria, Archaea and Eukaryotes. Here, we report a novel GH35 family β-galactosidase from the hyperthermophilic Thermoprotei archaeon Desulfurococcus amylolyticus (DaβGal). Unlike fungal monomeric six-domain β-galactosidases, the DaβGal enzyme is a dimer; it has an extra jelly roll domain D7 and three composite domains (D4, D5, and D6) that are formed by the distantly located polypeptide chain regions. The enzyme possesses a high specificity for β-d-galactopyranosides, and its distinguishing feature is the ability to cleave pNP-β-d-fucopyranoside. DaβGal efficiently catalyzes the hydrolysis of lactose at high temperatures, remains stable and active at 65 °С, and retains activity at 95 °С with a half-life time value equal to 73 min. These properties make archaeal DaβGal a more attractive candidate for biotechnology than the widely used fungal β-galactosidases.

Keywords: glycoside hydrolase; hyperthermophilic Archaea; lactose hydrolysis; protein structure; β‐galactosidase.

MeSH terms

  • Amino Acid Sequence
  • Archaeal Proteins / chemistry
  • Archaeal Proteins / genetics
  • Archaeal Proteins / metabolism
  • Enzyme Stability*
  • Hot Temperature
  • Hydrolysis
  • Kinetics
  • Lactose / chemistry
  • Lactose / metabolism
  • Models, Molecular
  • Protein Domains
  • Protein Folding
  • Substrate Specificity
  • beta-Galactosidase* / chemistry
  • beta-Galactosidase* / genetics
  • beta-Galactosidase* / metabolism

Substances

  • beta-Galactosidase
  • Archaeal Proteins
  • Lactose

Associated data

  • RefSeq/WP_042667189.1
  • RefSeq/MCD6195662.1
  • RefSeq/MCI4437633.1
  • RefSeq/MCX8180886.1
  • RefSeq/WP_012185953.1
  • RefSeq/NHV98552.1
  • RefSeq/HGT92402.1
  • RefSeq/MBO3800376.1