Acidithiobacillus acidisediminis sp. nov., an acidophilic sulphur-oxidizing chemolithotroph isolated from acid mine drainage sediment

Int J Syst Evol Microbiol. 2024 May;74(5):005868. doi: 10.1099/ijsem.0.005868.

Abstract

Strain S30A2T, isolated from the acid mine drainage sediment of Mengzi Copper Mine, Yunnan, is proposed to represent a novel species of the sulphur-oxidizing genus Acidithiobacillus. Cells were Gram-stain-negative, non-endospore forming, highly motile with one or two monopolar flagella and rod-shaped. The strain was mesophilic, growing at 30-50 °C (optimum, 38 °C), acidophilic, growing at pH 2.0-4.5 (optimum, pH 2.5), and tolerant of 0-4 % (w/v; 684 mol l-1) NaCl. The 16S rRNA gene-based sequence analysis showed that strain S30A2T belongs to the genus Acidithiobacillus and shows the largest similarity of 96.6 % to the type strain Acidithiobacillus caldus KUT. The genomic DNA G+C content of strain S30A2T was 59.25 mol%. The average nucleotide identity ANIb and ANIm values between strain S30A2T and A. caldus KUT were 70.95 and 89.78 %, respectively and the digital DNA-DNA hybridization value was 24.9 %. Strain S30A2T was strictly aerobic and could utilize elementary sulphur and tetrathionate to support chemolithotrophic growth. The major cellular fatty acid of S30A2T was C19 : 1ω7c. The respiratory quinones were ubiquinone-8 and ubiquinone-7. Based upon its phylogenetic, genetic, phenotypic, physiologic and chemotaxonomic characteristics, strain S30A2T is considered to represent a novel species of the genus Acidithiobacillus, for which the name Acidithiobacillus acidisediminis sp. nov. is proposed. The type strain is S30A2T (=CGMCC 1.17059T=KCTC 72580T).

Keywords: Acidithiobacillia; Acidithiobacillus; acid mine drainage; acidophile; sulphur-oxidizing.

MeSH terms

  • Acidithiobacillus* / classification
  • Acidithiobacillus* / genetics
  • Acidithiobacillus* / isolation & purification
  • Bacterial Typing Techniques*
  • Base Composition*
  • Chemoautotrophic Growth
  • China
  • Copper / metabolism
  • DNA, Bacterial* / genetics
  • Fatty Acids* / analysis
  • Geologic Sediments* / microbiology
  • Mining*
  • Nucleic Acid Hybridization*
  • Oxidation-Reduction
  • Phylogeny*
  • RNA, Ribosomal, 16S* / genetics
  • Sequence Analysis, DNA*
  • Sulfur* / metabolism
  • Ubiquinone

Substances

  • RNA, Ribosomal, 16S
  • Sulfur
  • DNA, Bacterial
  • Fatty Acids
  • Ubiquinone
  • Copper