Unveiling the Role of RNA Recognition Motif Proteins in Orchestrating Nucleotide-Binding Site and Leucine-Rich Repeat Protein Gene Pairs and Chloroplast Immunity Pathways: Insights into Plant Defense Mechanisms

Int J Mol Sci. 2024 May 20;25(10):5557. doi: 10.3390/ijms25105557.

Abstract

In plants, nucleotide-binding site and leucine-rich repeat proteins (NLRs) play pivotal roles in effector-triggered immunity (ETI). However, the precise mechanisms underlying NLR-mediated disease resistance remain elusive. Previous studies have demonstrated that the NLR gene pair Pik-H4 confers resistance to rice blast disease by interacting with the transcription factor OsBIHD1, consequently leading to the upregulation of hormone pathways. In the present study, we identified an RNA recognition motif (RRM) protein, OsRRM2, which interacted with Pik1-H4 and Pik2-H4 in vesicles and chloroplasts. OsRRM2 exhibited a modest influence on Pik-H4-mediated rice blast resistance by upregulating resistance genes and genes associated with chloroplast immunity. Moreover, the RNA-binding sequence of OsRRM2 was elucidated using systematic evolution of ligands by exponential enrichment. Transcriptome analysis further indicated that OsRRM2 promoted RNA editing of the chloroplastic gene ndhB. Collectively, our findings uncovered a chloroplastic RRM protein that facilitated the translocation of the NLR gene pair and modulated chloroplast immunity, thereby bridging the gap between ETI and chloroplast immunity.

Keywords: NLRs; RNA recognition motif; chloroplast immunity; rice blast.

MeSH terms

  • Binding Sites
  • Chloroplasts* / genetics
  • Chloroplasts* / metabolism
  • Disease Resistance / genetics
  • Gene Expression Regulation, Plant*
  • Leucine-Rich Repeat Proteins
  • NLR Proteins / genetics
  • NLR Proteins / metabolism
  • Oryza* / genetics
  • Oryza* / immunology
  • Oryza* / metabolism
  • Plant Diseases / genetics
  • Plant Diseases / immunology
  • Plant Immunity* / genetics
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • RNA Editing
  • RNA Recognition Motif Proteins / genetics
  • RNA Recognition Motif Proteins / metabolism

Substances

  • Plant Proteins
  • Leucine-Rich Repeat Proteins
  • RNA Recognition Motif Proteins
  • NLR Proteins