Transcriptomic-Proteomic Analysis Revealed the Regulatory Mechanism of Peanut in Response to Fusarium oxysporum

Int J Mol Sci. 2024 Jan 3;25(1):619. doi: 10.3390/ijms25010619.

Abstract

Peanut Fusarium rot, which is widely observed in the main peanut-producing areas in China, has become a significant factor that has limited the yield and quality in recent years. It is highly urgent and significant to clarify the regulatory mechanism of peanuts in response to Fusarium oxysporum. In this study, transcriptome and proteome profiling were combined to provide new insights into the molecular mechanisms of peanut stems after F. oxysporums infection. A total of 3746 differentially expressed genes (DEGs) and 305 differentially expressed proteins (DEPs) were screened. The upregulated DEGs and DEPs were primarily enriched in flavonoid biosynthesis, circadian rhythm-plant, and plant-pathogen interaction pathways. Then, qRT-PCR analysis revealed that the expression levels of phenylalanine ammonia-lyase (PAL), chalcone isomerase (CHI), and cinnamic acid-4-hydroxylase (C4H) genes increased after F. oxysporums infection. Moreover, the expressions of these genes varied in different peanut tissues. All the results revealed that many metabolic pathways in peanut were activated by improving key gene expressions and the contents of key enzymes, which play critical roles in preventing fungi infection. Importantly, this research provides the foundation of biological and chemical analysis for peanut disease resistance mechanisms.

Keywords: Fusarium oxysporum; peanut rot; proteomic profiling; regulatory mechanism; transcriptome analysis.

MeSH terms

  • Arachis* / genetics
  • Fusarium*
  • Gene Expression Profiling
  • Proteomics

Supplementary concepts

  • Fusarium oxysporum

Grants and funding

This work was supported by the grants from the Key Research and Development Project of Shandong Province (2023TZXD006), Natural Science Foundation of Shandong Province (ZR2020MC103, ZR2021MC040), Peanut Seed Industry Project in Shandong Province (no. 2022LZGC007), Central Government Guides the Development of Local Science and Technology in Shandong Province (YDZX2022131), Innovation Project of Shandong Academy of Agricultural Sciences (CXGC2023A46), and Major Science and Technology Projects of Xinjiang Uygur Autonomous Region (2022A02008-4).