Rege-1 promotes C. elegans survival by modulating IIS and TOR pathways

PLoS Genet. 2023 Aug 9;19(8):e1010869. doi: 10.1371/journal.pgen.1010869. eCollection 2023 Aug.

Abstract

Metabolic pathways are known to sense the environmental stimuli and result in physiological adjustments. The responding processes need to be tightly controlled. Here, we show that upon encountering P. aeruginosa, C. elegans upregulate the transcription factor ets-4, but this upregulation is attenuated by the ribonuclease, rege-1. As such, mutants with defective REGE-1 ribonuclease activity undergo ets-4-dependent early death upon challenge with P. aeruginosa. Furthermore, mRNA-seq analysis revealed associated global changes in two key metabolic pathways, the IIS (insulin/IGF signaling) and TOR (target of rapamycin) kinase signaling pathways. In particular, failure to degrade ets-4 mRNA in activity-defective rege-1 mutants resulted in upregulation of class II longevity genes, which are suppressed during longevity, and activation of TORC1 kinase signaling pathway. Genetic inhibition of either pathway way was sufficient to abolish the poor survival phenotype in rege-1 worms. Further analysis of ETS-4 ChIP data from ENCODE and characterization of one upregulated class II gene, ins-7, support that the Class II genes are activated by ETS-4. Interestingly, deleting an upregulated Class II gene, acox-1.5, a peroxisome β-oxidation enzyme, largely rescues the fat lost phenotype and survival difference between rege-1 mutants and wild-types. Thus, rege-1 appears to be crucial for animal survival due to its tight regulation of physiological responses to environmental stimuli. This function is reminiscent of its mammalian ortholog, Regnase-1, which modulates the intestinal mTORC1 signaling pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Caenorhabditis elegans Proteins* / genetics
  • Caenorhabditis elegans Proteins* / metabolism
  • Caenorhabditis elegans* / metabolism
  • Insulin / genetics
  • Insulin / metabolism
  • Mammals / genetics
  • RNA, Messenger / metabolism
  • Ribonucleases / genetics
  • Ribonucleases / metabolism
  • Signal Transduction / genetics

Substances

  • Caenorhabditis elegans Proteins
  • Insulin
  • Ribonucleases
  • RNA, Messenger

Grants and funding

This study was funded by grants to H.Y.T. from the Ministry of Science and Technology (MOST) of Taiwan (108-2320-B-002-075-MY3, 110-2634-F-002-044), the Ministry of Education in Taiwan, National Taiwan University (110L901402B), and National Taiwan University (110L893404, 111L892804, 112L891604). The funders did not play a role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. Y.T.T. received her salary from National Taiwan University (110L893404, 111L892804, 112L891604).