Autonomous and Programmable Reorganization of DNA-Based Polymers Using Redox Chemistry

Chemistry. 2023 May 26;29(30):e202300394. doi: 10.1002/chem.202300394. Epub 2023 Apr 19.

Abstract

We demonstrate here a strategy that allows the programmable and autonomous reorganization of self-assembled DNA polymers using redox chemistry. We have rationally designed different DNA monomers (tiles) that can co-assemble into tubular structures. The tiles can be orthogonally activated/deactivated with disulfide-linked DNA fuel strands that are degraded over time upon reduction because of the presence of a reducing agent in the system. The concentration of the disulfide fuels determines the activation kinetics of each DNA tile, which controls the degree of order/disorder in the formed co-polymer. The disulfide-reduction pathway can be employed together with enzymatic fuel-degradation pathways providing an additional level of control in the re-organization of DNA structures. Taking advantage of the different pH-sensitivities of disulfide-thiol and enzymatic reactions, we show that we can control the order in DNA-based co-polymers as a function of pH.

Keywords: DNA nanostructures; DNA nanotechnology; DNA polymers; reconfiguration; redox chemistry.

MeSH terms

  • DNA / chemistry
  • Disulfides
  • Kinetics
  • Nanostructures* / chemistry
  • Nanotechnology*
  • Nucleic Acid Conformation
  • Oxidation-Reduction

Substances

  • DNA
  • Disulfides