Cryo-EM structures of orphan GPR21 signaling complexes

Nat Commun. 2023 Jan 13;14(1):216. doi: 10.1038/s41467-023-35882-w.

Abstract

GPR21 is a class-A orphan G protein-coupled receptor (GPCR) and a potential therapeutic target for type 2 diabetes and other metabolic disorders. This receptor shows high basal activity in coupling to multiple G proteins in the absence of any known endogenous agonist or synthetic ligand. Here, we present the structures of ligand-free human GPR21 bound to heterotrimeric miniGs and miniG15 proteins, respectively. We identified an agonist-like motif in extracellular loop 2 (ECL2) that occupies the orthosteric pocket and promotes receptor activation. A side pocket that may be employed as a new ligand binding site was also uncovered. Remarkably, G protein binding is accommodated by a flexible cytoplasmic portion of transmembrane helix 6 (TM6) which adopts little or undetectable outward movement. These findings will enable the design of modulators for GPR21 for understanding its signal transduction and exploring opportunity for deorphanization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cryoelectron Microscopy
  • Diabetes Mellitus, Type 2*
  • Humans
  • Ligands
  • Protein Binding
  • Receptors, G-Protein-Coupled / metabolism
  • Signal Transduction

Substances

  • Receptors, G-Protein-Coupled
  • Ligands
  • GPR21 protein, human