The Role of Cytochrome P450 AbyV in the Final Stages of Abyssomicin C Biosynthesis

Angew Chem Int Ed Engl. 2023 Jan 16;62(3):e202213053. doi: 10.1002/anie.202213053. Epub 2022 Dec 8.

Abstract

Abyssomicin C and its atropisomer are potent inhibitors of bacterial folate metabolism. They possess complex polycyclic structures, and their biosynthesis has been shown to involve several unusual enzymatic transformations. Using a combination of synthesis and in vitro assays we reveal that AbyV, a cytochrome P450 enzyme from the aby gene cluster, catalyses a key late-stage epoxidation required for the installation of the characteristic ether-bridged core of abyssomicin C. The X-ray crystal structure of AbyV has been determined, which in combination with molecular dynamics simulations provides a structural framework for our functional data. This work demonstrates the power of combining selective carbon-13 labelling with NMR spectroscopy as a sensitive tool to interrogate enzyme-catalysed reactions in vitro with no need for purification.

Keywords: Antibiotics; Biosynthesis; P450 Enzymes; Polyketides; Structure Elucidation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bridged Bicyclo Compounds, Heterocyclic* / pharmacology
  • Cytochrome P-450 Enzyme System* / metabolism
  • Molecular Dynamics Simulation
  • Secondary Metabolism

Substances

  • abyssomicin C
  • Cytochrome P-450 Enzyme System
  • Bridged Bicyclo Compounds, Heterocyclic