The Metabolic Potential of Endophytic Actinobacteria Associated with Medicinal Plant Thymus roseus as a Plant-Growth Stimulator

Microorganisms. 2022 Sep 7;10(9):1802. doi: 10.3390/microorganisms10091802.

Abstract

Bio-fertilizer practice considers not only economical but also environmentally friendly, sustainable agriculture. Endophytes can play important beneficiary roles in plant development, directly, indirectly, or synergistically. In this study, the majority of our endophytic actinobacteria were able to possess direct plant growth-promoting (PGP) traits, including auxin (88%), ammonia (96%), siderophore production (94%), and phosphate solubilization (24%), along with cell-wall degrading enzymes such as protease (75%), cellulase (81%), lipase (81%), and chitinase (18%). About 45% of tested strains have an inhibitory effect on the phytopathogen Fusarium oxysporum, followed by 26% for Verticillium dahlia. Overall, our results showed that strains XIEG63 and XIEG55 were the potent strains with various PGP traits that caused a higher significant increase (p ≤ 0.05) in length and biomass in the aerial part and roots of tomato and cotton, compared to the uninoculated plants. Our data showed that the greatest inhibition percentages of two phytopathogens were achieved due to treatment with strains XIEG05, XIEG07, XIEG45, and XIEG51. The GC-MS analysis showed that most of the compounds were mainly alkanes, fatty acid esters, phenols, alkenes, and aromatic chemicals and have been reported to have antifungal activity. Our investigation emphasizes that endophytic actinobacteria associated with medicinal plants might help reduce the use of chemical fertilization and potentially lead to increased agricultural productivity and sustainability.

Keywords: Fusarium oxysporum; Thymus roseus; Verticillium dahliae; actinobacteria; agriculture sustainability; biocontrol; biofertilizer; endophytes; environmental microbiology; medicinal plants.

Grants and funding

This research was supported by the National key R&D Program of China (No. 2021YFD1500300), the National Natural Science Foundation of China (Grant No. 32061143043, 32050410306, and 32000084), and the Xinjiang Uygur Autonomous Region regional coordinated innovation project (Shanghai cooperation organization science and technology partnership program) (Nos. 2020E01047 and 2021E01018). O.A.A.M. was supported by the Available Position Talented Young Scientists Program funded by the Chinese Academy of Sciences President’s International Fellowship Initiative (Grant No. 2020VBB0011). The authors were also supported by the introduction project of high-level talents in the Xinjiang Uygur Autonomous Region.