Detection of lesions in the optic nerve with magnetic resonance imaging using a 3D convolutional neural network

Neuroimage Clin. 2022:36:103187. doi: 10.1016/j.nicl.2022.103187. Epub 2022 Sep 13.

Abstract

Background: Optic neuritis (ON) is one of the first manifestations of multiple sclerosis, a disabling disease with rising prevalence. Detecting optic nerve lesions could be a relevant diagnostic marker in patients with multiple sclerosis.

Objectives: We aim to create an automated, interpretable method for optic nerve lesion detection from MRI scans.

Materials and methods: We present a 3D convolutional neural network (CNN) model that learns to detect optic nerve lesions based on T2-weighted fat-saturated MRI scans. We validated our system on two different datasets (N = 107 and 62) and interpreted the behaviour of the model using saliency maps.

Results: The model showed good performance (68.11% balanced accuracy) that generalizes to unseen data (64.11%). The developed network focuses its attention to the areas that correspond to lesions in the optic nerve.

Conclusions: The method shows robustness and, when using only a single imaging sequence, its performance is not far from diagnosis by trained radiologists with the same constraint. Given its speed and performance, the developed methodology could serve as a first step to develop methods that could be translated into a clinical setting.

Keywords: CNN; Deep learning; MRI; Multiple sclerosis; Optic nerve; Optic neuritis.

MeSH terms

  • Humans
  • Magnetic Resonance Imaging / methods
  • Multiple Sclerosis* / diagnostic imaging
  • Multiple Sclerosis* / pathology
  • Neural Networks, Computer
  • Optic Nerve / diagnostic imaging
  • Optic Nerve / pathology
  • Optic Neuritis* / diagnostic imaging