Superspreading quantified from bursty epidemic trajectories

Sci Rep. 2021 Dec 16;11(1):24124. doi: 10.1038/s41598-021-03126-w.

Abstract

The quantification of spreading heterogeneity in the COVID-19 epidemic is crucial as it affects the choice of efficient mitigating strategies irrespective of whether its origin is biological or social. We present a method to deduce temporal and individual variations in the basic reproduction number directly from epidemic trajectories at a community level. Using epidemic data from the 98 districts in Denmark we estimate an overdispersion factor k for COVID-19 to be about 0.11 (95% confidence interval 0.08-0.18), implying that 10 % of the infected cause between 70 % and 87 % of all infections.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Basic Reproduction Number / statistics & numerical data*
  • COVID-19 / epidemiology
  • COVID-19 / transmission*
  • COVID-19 / virology
  • Denmark / epidemiology
  • Epidemics / prevention & control
  • Geography
  • Humans
  • Models, Theoretical*
  • SARS-CoV-2 / isolation & purification*
  • SARS-CoV-2 / physiology