Structural and functional characterization of bovine G1P[5] rotavirus VP8* protein

Virology. 2021 Nov:563:116-125. doi: 10.1016/j.virol.2021.08.009. Epub 2021 Aug 31.

Abstract

The widely used rotavirus (RV) vaccine, Rotateq, contained reassortment strains of human and bovine G1/2/3/4P[5] RVs. The functional and structural features of bovine G1P[5] VP8* were investigated. Bovine G1P[5] VP8* was identified to interact with sialic acids and sialic acid-containing glycans. In addition, P[5] VP8* recognized α-Gal histo-blood group antigens (HBGAs). Bovine G1P[5] VP8* did not hemagglutinate the tested red blood cells. The crystal structure of P[5] VP8* was determined at 1.7 Å. Structural superimposition revealed that P[5] VP8* was most close to human P[8] VP8*, while much further to VP8*s of porcine P[7] and rhesus P[3]. Sequence alignment showed that amino acids of the putative glycan binding site in P[5] VP8* were different to those in P[3]/P[7] VP8*s, indicating that P[5] VP8* may interact with glycans using different mechanism. This study provided more understanding of P[5] RV infection and the interactions of RV VP8* and glycans.

Keywords: Bovine P[5] rotavirus; Glycan binding specificity; Histo-blood group antigen; Sialic acid; VP8*; X-ray crystallographic structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cattle
  • Gene Expression Regulation, Viral / physiology*
  • Models, Molecular
  • Protein Conformation
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Rotavirus / classification*
  • Rotavirus / metabolism*
  • Viral Nonstructural Proteins / genetics
  • Viral Nonstructural Proteins / metabolism*

Substances

  • RNA-Binding Proteins
  • Viral Nonstructural Proteins
  • NS35 protein, rotavirus