TMEM120A is a coenzyme A-binding membrane protein with structural similarities to ELOVL fatty acid elongase

Elife. 2021 Aug 10:10:e71220. doi: 10.7554/eLife.71220.

Abstract

TMEM120A, also named as TACAN, is a novel membrane protein highly conserved in vertebrates and was recently proposed to be a mechanosensitive channel involved in sensing mechanical pain. Here we present the single-particle cryogenic electron microscopy (cryo-EM) structure of human TMEM120A, which forms a tightly packed dimer with extensive interactions mediated by the N-terminal coiled coil domain (CCD), the C-terminal transmembrane domain (TMD), and the re-entrant loop between the two domains. The TMD of each TMEM120A subunit contains six transmembrane helices (TMs) and has no clear structural feature of a channel protein. Instead, the six TMs form an α-barrel with a deep pocket where a coenzyme A (CoA) molecule is bound. Intriguingly, some structural features of TMEM120A resemble those of elongase for very long-chain fatty acids (ELOVL) despite the low sequence homology between them, pointing to the possibility that TMEM120A may function as an enzyme for fatty acid metabolism, rather than a mechanosensitive channel.

Keywords: TMEM120A; coenzyme a; human; ion channel; molecular biophysics; structural biology.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Carrier Proteins
  • Coenzyme A / metabolism*
  • Electrophysiological Phenomena
  • Fatty Acid Elongases / chemistry*
  • Fatty Acids / chemistry*
  • Fatty Acids / classification
  • Fatty Acids / metabolism
  • HEK293 Cells
  • Humans
  • Ion Channels / chemistry*
  • Ion Channels / genetics
  • Ion Channels / metabolism*
  • Lipid Metabolism
  • Membrane Proteins
  • Membranes
  • Protein Binding

Substances

  • Carrier Proteins
  • Fatty Acids
  • Ion Channels
  • Membrane Proteins
  • Fatty Acid Elongases
  • Coenzyme A