Effect of pyrene and phenanthrene in shaping bacterial communities in seagrass meadows sediments

Arch Microbiol. 2021 Sep;203(7):4259-4272. doi: 10.1007/s00203-021-02410-7. Epub 2021 Jun 7.

Abstract

Polycyclic aromatic hydrocarbons (PAHs), originating from anthropogenic and natural sources, are highly concerned environmental pollutants. This study investigated the impact of two model PAHs (pyrene and phenanthrene) on bacterial community succession in the seagrass meadows sediment in a lab-scale microcosm. Halophila ovalis sediment slurry microcosms were established, one group was placed as a control, and the other two were treated with pyrene and phenanthrene. Bacterial community succession in response to respective PAHs was investigated by 16S rRNA amplicon sequencing. The results demonstrated that bacterial diversity decrease in each microcosm during the incubation process; however, the composition of bacterial communities in each microcosm was significantly different. Proteobacteria (37-89%), Firmicutes (9-41%), and Bacteroides (7-21%) were the predominant group at the phylum levels. Their abundance varies during the incubation process. Several previously reported hydrocarbon-degrading genera, such as Pseudomonas, Spinghobium, Sphingobacterium, Mycobacterium, Pseudoxanthomonas, Idiomarina, Stenotrophomonas, were detected in higher abundance in pyrene- and phenanthrene-treated microcosms. However, these genera were distinctly distributed in the pyrene and phenanthrene treatments, suggesting that certain bacterial groups favorably degrade different PAHs. Statistical analyses, such as ANOSIM and PERMANOVA, also revealed that significant differences existed among the treatments' bacterial consortia (P < 0.05). This work showed that polycyclic aromatic hydrocarbon significantly affects bacterial community succession, and different PAHs might influence the bacterial community succession differently.

Keywords: Daya Bay; Degradation; Illumina MiSeq Sequencing; Isolation; PAHs; Seagrass sediments.

MeSH terms

  • Bacteria* / drug effects
  • Geologic Sediments* / chemistry
  • Geologic Sediments* / microbiology
  • Microbiota* / drug effects
  • Phenanthrenes* / pharmacology
  • Pyrenes* / pharmacology
  • RNA, Ribosomal, 16S / genetics

Substances

  • Phenanthrenes
  • Pyrenes
  • RNA, Ribosomal, 16S