Shotgun Proteomics of Isolated Urinary Extracellular Vesicles for Investigating Respiratory Impedance in Healthy Preschoolers

Molecules. 2021 Feb 26;26(5):1258. doi: 10.3390/molecules26051258.

Abstract

Urine proteomic applications in children suggested their potential in discriminating between healthy subjects from those with respiratory diseases. The aim of the current study was to combine protein fractionation, by urinary extracellular vesicle isolation, and proteomics analysis in order to establish whether different patterns of respiratory impedance in healthy preschoolers can be characterized from a protein fingerprint. Twenty-one 3-5-yr-old healthy children, representative of 66 recruited subjects, were selected: 12 late preterm (LP) and 9 full-term (T) born. Children underwent measurement of respiratory impedance through Forced Oscillation Technique (FOT) and no significant differences between LP and T were found. Unbiased clustering, based on proteomic signatures, stratified three groups of children (A, B, C) with significantly different patterns of respiratory impedance, which was slightly worse in group A than in groups B and C. Six proteins (Tripeptidyl peptidase I (TPP1), Cubilin (CUBN), SerpinA4, SerpinF1, Thy-1 membrane glycoprotein (THY1) and Angiopoietin-related protein 2 (ANGPTL2)) were identified in order to type the membership of subjects to the three groups. The differential levels of the six proteins in groups A, B and C suggest that proteomic-based profiles of urinary fractionated exosomes could represent a link between respiratory impedance and underlying biological profiles in healthy preschool children.

Keywords: extracellular vesicle; forced oscillation technique; preschooler healthy children; proteomics; urine fractionation.

MeSH terms

  • Aminopeptidases / urine
  • Angiopoietin-Like Protein 2
  • Angiopoietin-like Proteins / urine
  • Child, Preschool
  • Dipeptidyl-Peptidases and Tripeptidyl-Peptidases / urine
  • Electric Impedance
  • Extracellular Vesicles / genetics*
  • Eye Proteins / urine
  • Female
  • Humans
  • Male
  • Nerve Growth Factors / urine
  • Proteome / chemistry
  • Proteome / genetics*
  • Proteomics*
  • Receptors, Cell Surface / genetics
  • Respiratory Function Tests
  • Serine Proteases / urine
  • Serpins / urine
  • Thy-1 Antigens / urine
  • Tripeptidyl-Peptidase 1
  • Urine / chemistry*

Substances

  • ANGPTL2 protein, human
  • Angiopoietin-Like Protein 2
  • Angiopoietin-like Proteins
  • Eye Proteins
  • Nerve Growth Factors
  • Proteome
  • Receptors, Cell Surface
  • Serpins
  • Thy-1 Antigens
  • Tripeptidyl-Peptidase 1
  • intrinsic factor-cobalamin receptor
  • kallistatin
  • pigment epithelium-derived factor
  • Serine Proteases
  • Aminopeptidases
  • Dipeptidyl-Peptidases and Tripeptidyl-Peptidases
  • TPP1 protein, human