Connecting Timescales in Biology: Can Early Dynamical Measurements Predict Long-Term Outcomes?

Trends Cancer. 2021 Apr;7(4):301-308. doi: 10.1016/j.trecan.2020.12.008. Epub 2021 Jan 13.

Abstract

Prediction of long-term outcomes from short-term measurements remains a fundamental challenge. Quantitative assessment of signaling dynamics, and the resulting transcriptomic and proteomic responses, has yielded fundamental insights into cellular outcomes. However, the utility of these measurements is limited by their short timescale (hours to days), while the consequences of these events frequently unfold over longer timescales. Here, we discuss the predictive power of static and dynamic measurements, drawing examples from fields that have harnessed the predictive capabilities of such measurements. We then explore potential approaches to close this timescale gap using complementary measurements and computational approaches, focusing on the example of dynamic measurements of signaling factors and their impacts on cellular outcomes.

Keywords: cell fate; markers; outcomes; p53; signaling dynamics; timescale.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Genomics
  • Humans
  • Signal Transduction*
  • Time Factors