Reply to: Examining microbe-metabolite correlations by linear methods
Nat Methods
.
2021 Jan;18(1):40-41.
doi: 10.1038/s41592-020-01007-0.
Epub 2021 Jan 4.
Authors
James T Morton
1
2
,
Daniel McDonald
1
3
,
Alexander A Aksenov
4
5
,
Louis Felix Nothias
4
5
,
James R Foulds
6
,
Robert A Quinn
7
,
Michelle H Badri
8
,
Tami L Swenson
9
,
Marc W Van Goethem
9
,
Trent R Northen
9
10
,
Yoshiki Vazquez-Baeza
3
11
,
Mingxun Wang
4
5
,
Nicholas A Bokulich
12
13
,
Aaron Watters
14
,
Se Jin Song
1
3
,
Richard Bonneau
8
14
15
16
,
Pieter C Dorrestein
4
5
,
Rob Knight
17
18
19
20
Affiliations
1
Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.
2
Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.
3
Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.
4
Collaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, CA, USA.
5
Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
6
Department of Information Systems, University of Maryland-Baltimore County, Baltimore, MD, USA.
7
Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, USA.
8
Department of Biology, New York University, New York, NY, USA.
9
Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
10
DOE Joint Genome Institute, Walnut Creek, CA, USA.
11
Jacobs School of Engineering, University of California, San Diego, La Jolla, CA, USA.
12
The Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.
13
Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
14
Flatiron Institute, Simons Foundation, New York, NY, USA.
15
Department of Computer Science, Courant Institute, New York, NY, USA.
16
Center for Data Science, New York University, New York, NY, USA.
17
Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA. rknight@ucsd.edu.
18
Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA. rknight@ucsd.edu.
19
Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA. rknight@ucsd.edu.
20
Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA. rknight@ucsd.edu.
PMID:
33398188
DOI:
10.1038/s41592-020-01007-0
No abstract available
Publication types
Letter
Comment
MeSH terms
Microbial Interactions*
Grants and funding
R01 DK103358/DK/NIDDK NIH HHS/United States