Systematic Review of Sequencing Studies and Gene Expression Profiling in Familial Meniere Disease

Genes (Basel). 2020 Nov 27;11(12):1414. doi: 10.3390/genes11121414.

Abstract

Familial Meniere Disease (FMD) is a rare inner ear disorder characterized by episodic vertigo associated with sensorineural hearing loss, tinnitus and/or aural fullness. We conducted a systematic review to find sequencing studies segregating rare variants in FMD to obtain evidence to support candidate genes for MD. After evaluating the quality of the retrieved records, eight studies were selected to carry out a quantitative synthesis. These articles described 20 single nucleotide variants (SNVs) in 11 genes (FAM136A, DTNA, PRKCB, COCH, DPT, SEMA3D, STRC, HMX2, TMEM55B, OTOG and LSAMP), most of them in singular families-the exception being the OTOG gene. Furthermore, we analyzed the pathogenicity of each SNV and compared its allelic frequency with reference datasets to evaluate its role in the pathogenesis of FMD. By retrieving gene expression data in these genes from different databases, we could classify them according to their gene expression in neural or inner ear tissues. Finally, we evaluated the pattern of inheritance to conclude which genes show an autosomal dominant (AD) or autosomal recessive (AR) inheritance in FMD.

Keywords: Mendelian disorders; Meniere’s disease; exome sequencing; familial segregation; inheritance pattern; rare variant; sensorineural hearing loss; single nucleotide variant; vestibular disorders.

Publication types

  • Research Support, Non-U.S. Gov't
  • Systematic Review

MeSH terms

  • Alleles
  • Causality
  • DNA Mutational Analysis
  • Exome Sequencing*
  • Family Health
  • Female
  • Gene Expression Profiling*
  • Gene Frequency
  • Genes, Dominant
  • Genes, Recessive
  • Genetic Association Studies*
  • Genetic Heterogeneity
  • Hearing Loss, Sensorineural / genetics*
  • Humans
  • Male
  • Meniere Disease / genetics*
  • Polymorphism, Single Nucleotide*