Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization

Nat Commun. 2020 Oct 22;11(1):5342. doi: 10.1038/s41467-020-18993-6.

Abstract

Mitochondrial ATP synthases form functional homodimers to induce cristae curvature that is a universal property of mitochondria. To expand on the understanding of this fundamental phenomenon, we characterized the unique type III mitochondrial ATP synthase in its dimeric and tetrameric form. The cryo-EM structure of a ciliate ATP synthase dimer reveals an unusual U-shaped assembly of 81 proteins, including a substoichiometrically bound ATPTT2, 40 lipids, and co-factors NAD and CoQ. A single copy of subunit ATPTT2 functions as a membrane anchor for the dimeric inhibitor IF1. Type III specific linker proteins stably tie the ATP synthase monomers in parallel to each other. The intricate dimer architecture is scaffolded by an extended subunit-a that provides a template for both intra- and inter-dimer interactions. The latter results in the formation of tetramer assemblies, the membrane part of which we determined to 3.1 Å resolution. The structure of the type III ATP synthase tetramer and its associated lipids suggests that it is the intact unit propagating the membrane curvature.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATPase Inhibitory Protein
  • Cryoelectron Microscopy
  • Membrane Lipids / chemistry
  • Mitochondrial Membranes / chemistry
  • Mitochondrial Membranes / enzymology
  • Mitochondrial Membranes / ultrastructure
  • Mitochondrial Proton-Translocating ATPases / chemistry*
  • Mitochondrial Proton-Translocating ATPases / classification
  • Mitochondrial Proton-Translocating ATPases / ultrastructure
  • Models, Molecular
  • Protein Interaction Domains and Motifs
  • Protein Multimerization
  • Protein Structure, Quaternary
  • Protein Subunits / chemistry
  • Proteins / chemistry
  • Proteins / ultrastructure
  • Protozoan Proteins / chemistry
  • Protozoan Proteins / ultrastructure
  • Tetrahymena thermophila / enzymology
  • Tetrahymena thermophila / ultrastructure

Substances

  • Membrane Lipids
  • Protein Subunits
  • Proteins
  • Protozoan Proteins
  • Mitochondrial Proton-Translocating ATPases