Long-Read Genome Sequence Resource of Ascochyta versabilis Causing Leaf Spot Disease in Pseudostellaria heterophylla

Mol Plant Microbe Interact. 2020 Dec;33(12):1438-1440. doi: 10.1094/MPMI-05-20-0137-A. Epub 2020 Oct 26.

Abstract

Ascochyta versabilis is the fungal pathogen that causes the severe leaf spot disease of Pseudostellaria heterophylla (Miq.) Pax, a vital Chinese herbal plant. Here, we deployed PacBio single-molecule real-time long-read sequencing technology to generate a near-complete genome assembly for the A. versabilis KC1 strain and obtained a total of 9.80 Gb raw reads. These reads were processed into a 41.05 Mb genome assembly containing 95 contigs with N50 of 1.70 Mb and a maximum length of 3.93 Mb. A total of 10,457 gene models, of which 1,004 encode putatively secreted proteins, were identified in the genome. This high-quality genome assembly and gene annotation resource will facilitate the institution of functional genetic studies aimed at providing a better insight into the infection mechanisms of A. versabilis to support the development of effective control strategies for leaf spot disease of P. heterophylla.

Keywords: Ascochyta versabilis; fungal pathogen; genome; leaf spot disease.

MeSH terms

  • Ascomycota* / genetics
  • Caryophyllaceae / microbiology
  • Genome, Fungal* / genetics
  • Plant Diseases / microbiology

Supplementary concepts

  • Ascochyta versabilis