Preliminary crystal structure of Acinetobacter glutaminasificans glutaminase-asparaginase

J Biol Chem. 1988 Jan 5;263(1):150-6.

Abstract

The preliminary structure of a glutaminase-asparaginase from Acinetobacter glutaminasificans is reported. The structure was determined at 3.0-A resolution with a combination of phase information from multiple isomorphous replacement at 4-5-A resolution and phase improvement and extension by two density modification techniques. The electron density map was fitted by a polypeptide chain that was initially polyalanine. This was subsequently replaced by a polypeptide with an amino acid sequence in agreement with the sizes and shapes of the side chain electron densities. The crystallographic R factor is 0.300 following restrained least squares refinement with data to 2.9-A resolution. The A. glutaminasificans glutaminase-asparaginase subunit folds into two domains: the aminoterminal domain contains a five-stranded beta sheet surrounded by five alpha helices, while the carboxyl-terminal domain contains three alpha helices and less regular structure. The connectivity is not fully determined at present, due in part to the lack of a complete amino acid sequence. The A. glutaminasificans glutaminase-asparaginase structure has been used successfully to determine the relative orientations of the molecules in crystals of Pseudomonas 7A glutaminase-asparaginase, in crystals of Vibrio succinogenes asparaginase, and in a new crystal form of Escherichia coli asparaginase (space group 1222, one subunit per asymmetric unit).

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Acinetobacter / enzymology*
  • Amidohydrolases* / isolation & purification
  • Amidohydrolases* / metabolism
  • Asparaginase / metabolism
  • Crystallization
  • Escherichia coli / enzymology
  • Macromolecular Substances
  • Models, Molecular
  • Protein Conformation
  • Pseudomonas / enzymology
  • Structure-Activity Relationship
  • Vibrio / enzymology
  • X-Ray Diffraction

Substances

  • Macromolecular Substances
  • Amidohydrolases
  • Asparaginase
  • glutamin-(asparagin-)ase