Next generation sequencing to decipher concurrent loss of PMS2 and MSH6 in colorectal cancer

Diagn Pathol. 2020 Jul 14;15(1):84. doi: 10.1186/s13000-020-01001-2.

Abstract

Background: Immunohistochemistry (IHQ) is commonly used for the detection of mismatch repair proteins deficiency (MMRD). One very infrequent abnormal pattern of MMR protein expression is the loss of PMS2 and MSH6, with intact expression of MLH1 and MSH2.

Case presentation: We review the frequency of this MMRD IHC pattern among 108 colorectal (CRCs) and 35 endometrial cancers in our files with loss of expression of at least one protein, and present two CRCs showing loss of PMS2 and MSH6 protein expression (1.9% of CRCs). NGS analysis of these tumours identified PMS2 mutations (R134* germline mutation in one tumour and M1R and c.1239delA somatic mutation in the other) as the primary event and somatic MSH6 mutation (c.3261dupC) as the secondary event in both tumours.

Conclusions: This study suggests that Next Generation Sequencing (NGS) tumour analysis should be considered in the algorithm of Lynch syndrome screening to detect MMR gen somatic mutation in inconclusive cases.

Keywords: Case report; Colorectal cancer; Lynch syndrome; Mismatch repair deficiency; NGS.

Publication types

  • Case Reports

MeSH terms

  • Adult
  • Aged
  • Colorectal Neoplasms / genetics*
  • Colorectal Neoplasms, Hereditary Nonpolyposis / diagnosis*
  • Colorectal Neoplasms, Hereditary Nonpolyposis / genetics*
  • DNA-Binding Proteins / genetics*
  • Female
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Mismatch Repair Endonuclease PMS2 / genetics*
  • Mutation
  • Sequence Analysis, DNA

Substances

  • DNA-Binding Proteins
  • G-T mismatch-binding protein
  • PMS2 protein, human
  • Mismatch Repair Endonuclease PMS2