Clinical evaluation of an in-house-developed real-time RT-PCR assay for serotyping of dengue virus

Arch Virol. 2020 Oct;165(10):2311-2315. doi: 10.1007/s00705-020-04725-0. Epub 2020 Jul 7.

Abstract

In the present study, an in-house-developed real-time RT-PCR (rRT-PCR) for serotyping of dengue virus (DENV) was evaluated for its performance, using 612 clinical samples. Compared to the composite reference standard, the in-house-developed rRT-PCR had an overall sensitivity of 97.5% and a specificity of 100%. The assay had a sensitivity of 100%, 95.6%. 96.9% and 100% for detecting DENV-1, DENV-2, DENV-3 and DENV-4, respectively. We recommend periodic evaluation of real-time RT-PCR assays for detecting DENV serotypes with a large number of samples and the use of at least two assays that target different regions of DENV genomes.

MeSH terms

  • Dengue / virology
  • Dengue Virus / genetics*
  • Humans
  • Molecular Diagnostic Techniques / methods
  • RNA, Viral / genetics
  • Real-Time Polymerase Chain Reaction / methods*
  • Reverse Transcriptase Polymerase Chain Reaction / methods*
  • Sensitivity and Specificity
  • Serogroup
  • Serotyping / methods*

Substances

  • RNA, Viral